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View Structure Prediction Details

Protein: BSP1
Organism: Saccharomyces cerevisiae
Length: 576 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BSP1.

Description E-value Query
Range
Subject
Range
ZAN_MOUSE - Zonadhesin OS=Mus musculus GN=Zan PE=1 SV=1
266.0 [0..1] [562..554]
gi|16554449, gi|... - gi|16554449|ref|NP_003377.1| zonadhesin isoform 3 [Homo sapiens], gi|12667414|gb|AAK01433.1|AF332977...
238.0 [0..42] [541..535]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYERDPEL VNFLSKVEDL NSKRYSNIPS SKPAGEALSP VRSHNSGEYR RADMMTGKNV  60
   61 EGCDNLAYRS AYNYEMTFSP KKTHYSLSEL NLERITP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPDLEGSASQ KEKKFLISEE DYLLLQKLKA SQTYNDSNAD KNLPSFEKGP RMPSRGRPRP  60
   61 REKEIITIQY DFELPGRADI PSSSSSSSPP PLPTRRDHIK ITDGNEEKPL LPTRPNKAEV 120
  121 TESPSSRSIK PDAVVPERVK PAPPVSRSTK PASFLSSLED NKLTKAKSYN SEMETPKTTV 180
  181 KSSHIDYLDS IQLKPTTLSP TMKNKPKPTP PSPPAKRIPR SESFIKSMLN SNLTTTSKPS 240
  241 LPEKPQKLRN ANLAAHKTKP SIPPKKVELN IVLPELRPVE TSPTKQNFEN SIDLPKLRSS 300
  301 NRNIKKEEED SIPEAIKGIQ NLKKTKQQKP AIPQKKSFLT NNSKNTTLKN GDDINKLNDE 360
  361 IEALSLR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [465-576]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNLKKRPPTA PQRKISLPEA LRKVELMKKS KTEPVLESSN ELSINAKLDA IIASRNLRAS  60
   61 NTLPELSGVN TNIATSDKYT TSRDETVKET KPLVHPNKNR TRGPRRKLPT RV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle