YRC Public Data Repository - Protein Structure Prediction

Protein:	MET16
Organism:	Saccharomyces cerevisiae
Length:	261 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET16.

Description	E-value	Query Range	Subject Range
MET16 - 3'-phosphoadenylsulfate reductase, reduces 3'-phosphoadenylyl sulfate to adenosine-3',5'-bisphosphat... gi\|190408091 - gi\|190408091\|gb\|EDV11356.1\| 3'phosphoadenylylsulfate reductase [Saccharomyces cerevisiae RM11-1a] MET16_YEAST - Phosphoadenosine phosphosulfate reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G... gi\|207340223 - gi\|207340223\|gb\|EDZ68641.1\| YPR167Cp-like protein [Saccharomyces cerevisiae AWRI1631]	8.0E-73	[1..261]	[1..261]
gi\|32417434, gi\|... - gi\|38566885\|emb\|CAE76190.1\| probable PHOSPHOADENOSINE PHOSPHOSULFATE REDUCTASE [Neurospora crassa], ... gi\|85115415 - gi\|85115415\|ref\|XP_964870.1\| phosphoadenosine phosphosulfate reductase [Neurospora crassa OR74A]	2.0E-68	[2..261]	[38..296]
gi\|10945373 - gi\|10945373\|gb\|AAG24520.1\|AF227433_1 3'-phosphoadenosine-5'-phosphosulfate reductase [Penicillium ch...	1.0E-66	[2..259]	[33..287]
MT16_EMENI, MET1... - (P56859) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8) (PAPS reductase, thioredoxin depende...	4.0E-66	[2..258]	[27..280]
gi\|6841068 - gi\|6841068\|gb\|AAF28889.1\|AF123267_1 3'phosphoadenylyl thiosulfotransferase [Aspergillus terreus]	4.0E-65	[2..257]	[32..284]
gi\|12831474 - gi\|12831474\|gb\|AAB05871.2\| PAPS-reductase-like protein [Catharanthus roseus]	4.0E-65	[4..257]	[77..329]
gi\|34099827 - gi\|34099827\|gb\|AAQ57202.1\| adenosine 5' phosphosulfate reductase [Populus alba x Populus tremula]	8.0E-65	[4..259]	[74..329]
APR2_ARATH - 5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=1 SV=2	9.0E-65	[15..261]	[83..330]

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Predicted Domain #1

Region A:
Residues: [1-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTYHLNNDI IVTQEQLDHW NEQLIKLETP QEIIAWSIVT FPHLFQTTAF GLTGLVTIDM  60
   61 LSKLSEKYYM PELLFIDTLH HFPQTLTLKN EIEKKYYQPK NQTIHVYKPD GCESEADFAS 120
  121 KYGDFLWEKD DDKYDYLAKV EPAHRAYKEL HISAVFTGRR KSQGSARSQL SIIEIDELNG 180
  181 ILKINPLINW TFEQVKQYID ANNVPYNELL DLGYRSIGDY HSTQPVKEGE DERAGRWKGK 240
  241 AKTECGIHEA SRFAQFLKQD A

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	220.035458
Match:	1sur__
Description:	Phosphoadenylyl sulphate (PAPS) reductase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits