YRC Public Data Repository - Protein Structure Prediction

Protein:	SUE1
Organism:	Saccharomyces cerevisiae
Length:	206 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUE1.

Description	E-value	Query Range	Subject Range
gi\|151942922 - gi\|151942922\|gb\|EDN61268.1\| conserved protein [Saccharomyces cerevisiae YJM789] SUE1_YEAST - Protein SUE1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUE1 PE=4 SV... SUE1 - Mitochondrial protein required for degradation of unstable forms of cytochrome c gi\|190408074 - gi\|190408074\|gb\|EDV11339.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]	4.0E-93	[1..206]	[1..206]

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Predicted Domain #1

Region A:
Residues: [1-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLKRTKIR GVSVSFVSLQ RRTHSRLVNP IRQQHQQITK QRSSKILKNA HFYDFRSLPK  60
   61 VPTTQYLEAR ELTRDILYSG YRPVMYPVKE NPLFRDKKRK SLQTLLTMNE KTNAEAKTID 120
  121 EKKHKNILFG ERGTGGIMSG GVNGTWKYNP TVPNELLPFN WWSTSSMGME YFPEWKNVPP 180
  181 YMMRKLKPFD KALQMRLTHK SKKKMK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits