YRC Public Data Repository - Protein Structure Prediction

Protein:	TOM5
Organism:	Saccharomyces cerevisiae
Length:	50 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOM5.

Description	E-value	Query Range	Subject Range
TOM5_YEAST - Mitochondrial import receptor subunit TOM5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ... gi\|207340260 - gi\|207340260\|gb\|EDZ68665.1\| YPR133W-Ap-like protein [Saccharomyces cerevisiae AWRI1631] TOM5 - Component of the TOM (translocase of outer membrane) complex responsible for recognition and initial... gi\|190408058 - gi\|190408058\|gb\|EDV11323.1\| mitochondrial import receptor subunit TOM5 [Saccharomyces cerevisiae RM1... gi\|151942907 - gi\|151942907\|gb\|EDN61253.1\| translocase of the outer membrane [Saccharomyces cerevisiae YJM789]	6.0E-14	[1..50]	[1..50]

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Predicted Domain #1

Region A:
Residues: [1-50]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLPQQEVS EEEKRAHQEQ TEKTLKQAAY VAAFLWVSPM IWHLVKKQWK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits