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View Structure Prediction Details

Protein: YPR130C
Organism: Saccharomyces cerevisiae
Length: 135 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YPR130C.

Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYILNDILNL HRNIILKFNV GRRLRKLVGW SAVRVVLVLI GATIILVVIS VLVVSTLAAS  60
   61 SSVSSVSPII STPTTEASRV KSWSGRSLSK GVNVQHFFFL PSHIGISFSR SGDGVEKRRF 120
  121 FIIKLLIRFI LLVNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.529 a.25.1 Ferritin-like
View Download 0.335 a.25.1 Ferritin-like
View Download 0.314 a.22.1 Histone-fold
View Download 0.273 a.24.9 alpha-catenin/vinculin
View Download 0.264 a.22.1 Histone-fold
View Download 0.257 a.24.9 alpha-catenin/vinculin
View Download 0.250 a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.234 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.207 a.25.1 Ferritin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle