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View Structure Prediction Details

Protein: YPR123C
Organism: Saccharomyces cerevisiae
Length: 144 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YPR123C.

Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISIPEELL LSDDDIPDMP DMLESEVVCA LAELVGVLLI DIDIPDIELL PIDILAIDDI  60
   61 VDANVLLALD IASMLIDDML DNIVLLALDI ASMLIDAILD ATVLDALDMA SIFMLLPIFI 120
  121 PSILNVKYNT LFFIFYSILP TNVI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.588 a.24.9 alpha-catenin/vinculin
View Download 0.565 a.246.1 Description not found.
View Download 0.551 a.1.1 Globin-like
View Download 0.551 a.1.1 Globin-like
View Download 0.543 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.543 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.486 a.4.5 "Winged helix" DNA-binding domain
View Download 0.444 a.126.1 Serum albumin-like
View Download 0.389 a.2.7 tRNA-binding arm
View Download 0.342 a.185.1 Gametocyte protein Pfg27


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle