| Protein: | CLB5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 435 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLB5.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [8..421] | [2..417] |
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0.0 | [8..421] | [2..418] |
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0.0 | [8..421] | [2..417] |
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0.0 | [8..421] | [2..418] |
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0.0 | [8..417] | [2..417] |
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0.0 | [8..421] | [2..411] |
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0.0 | [1..435] | [1..435] |
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0.0 | [8..419] | [2..385] |
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0.0 | [29..421] | [2..380] |
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Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MGENHDHEQS IKRNSMIYNE NERQLCNSNL KILQNKRALS KNDSSSKQQV QDSKPRRALT 60
61 DVPVNNNPLS QNKRIVAGSK AAKVRREENI RPIVSAVQKR QIYNDRTAAE QEEEEEEEGE 120
121 DDDAASIVNK KRRIDAE
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| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.750 | 0.022 | regulation of cyclin-dependent protein kinase activity | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.750 | 0.021 | regulation of S phase of mitotic cell cycle | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.527 | 0.019 | regulation of cyclin-dependent protein kinase activity | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.527 | 0.017 | regulation of S phase of mitotic cell cycle | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.658 | 0.015 | regulation of cyclin-dependent protein kinase activity | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.658 | 0.015 | regulation of S phase of mitotic cell cycle | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.781 | 0.009 | regulation of cyclin-dependent protein kinase activity | a.63.1 | Apolipophorin-III |
| View | Download | 0.781 | 0.009 | regulation of S phase of mitotic cell cycle | a.63.1 | Apolipophorin-III |
| View | Download | 0.702 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.702 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.520 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.471 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.445 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.436 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.413 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.382 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.351 | N/A | N/A | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.347 | N/A | N/A | e.34.1 | NSP3 homodimer |
| View | Download | 0.341 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.340 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.336 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.330 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.329 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.328 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.315 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.315 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.313 | N/A | N/A | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
| View | Download | 0.310 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.303 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.301 | N/A | N/A | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| View | Download | 0.300 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.298 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.297 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.294 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.292 | N/A | N/A | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.291 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.290 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.277 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.268 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.265 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.260 | N/A | N/A | f.21.1 | Transmembrane di-heme cytochromes |
| View | Download | 0.259 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.258 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.256 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.251 | N/A | N/A | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.247 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.232 | N/A | N/A | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.227 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.227 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.225 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.225 | N/A | N/A | a.116.1 | GTPase activation domain, GAP |
| View | Download | 0.210 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.209 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.201 | N/A | N/A | a.7.1 | Spectrin repeat |
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Region A: Residues: [138-172] |
1 11 21 31 41 51
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1 GVSEIVGWQD LDYVEKDDTA MVAEYSAEIF AFLYR
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Region B: Residues: [298-435] |
1 11 21 31 41 51
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1 PLNFLRRISK ADDYDPVNRN IGKFILEYAY CCHQFIHLPP STVSAMAMYI ARRMTNRNKN 60
61 ELWNGTLQHY SGGIDPIHDE AFQSLCIDLV KDIASSKTHL DSLILKYKKP RYGSVYFQTF 120
121 KWCTSEMHSN FQNLFNLK
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| Detection Method: | |
| Confidence: | 295.232149 |
| Match: | 1vin__ |
| Description: | Cyclin A |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [173-297] |
1 11 21 31 41 51
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1 RELETLPSHN YLLDKTSKYY LRPSMRTILV DWLVEVHEKF QCYPETLFLS INLMDRFLAK 60
61 NKVTMNKLQL LAVTSLFIAA KFEEVNLPKL AEYAYITDGA ASKNDIKNAE MFMLTSLEFN 120
121 IGWPN
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| Detection Method: | |
| Confidence: | 295.232149 |
| Match: | 1vin__ |
| Description: | Cyclin A |
| Matching Structure (courtesy of the PDB): |
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