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View Structure Prediction Details

Protein: YPR109W
Organism: Saccharomyces cerevisiae
Length: 294 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR109W.

Description E-value Query
Range
Subject
Range
YPR109W - Predicted membrane protein; dipoid deletion strain has high budding index
YPR09_YEAST - Uncharacterized membrane protein YPR109W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
0.0 [1..294] [1..294]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNFESTAEG NLSIGNKRVY ELRKRNFQRN LVNNLSFLGY VLISLEYIKY DRTVWTLITR  60
   61 AIVQSLISSP FPSDAKLRRL ATLGADNNTT GVATLPGGRS IRFPGMFGTE MLYNSSSEAE 120
  121 QQDHDDTAIV SMKKQIRKFL FHGCLSLNML FIILTILFPI DFFEPLSGSE PVDDGPKNTP 180
  181 SPFSNSDGLL LGERRGGLFL QMIGERLPKS NFSGNLGLVM FEFSILIVQF TLFSLTCVVL 240
  241 ADLDFEEPER LEPVNSDGYD GSVIVARIPL NKTMNAILND GNINDNNENA SNSV

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle