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View Structure Prediction Details

Protein: YPR084W
Organism: Saccharomyces cerevisiae
Length: 456 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR084W.

Description E-value Query
Range
Subject
Range
YPR084W - Putative protein of unknown function
YP084_YEAST - Uncharacterized protein YPR084W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR084W ...
0.0 [1..456] [1..456]

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Predicted Domain #1
Region A:
Residues: [1-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKASEERP IRLAVLGGTS TGKTSLVSRL TVNIVHEVHY PTRNQTNWLF GFVPSSILAR  60
   61 AILDEQAHER LCLRSPSSQT LEPIFPSPQV SKNVLLSPLV FQASTDNFQS VRLHNKSHSR 120
  121 RSLSLDKSDS PLYQTFSNDI NSQSVPKIKA DQLNVIEHFK LPLNYIPPTY APIQIDIIDT 180
  181 PGFSPDNVVP FLEVSLFRNL GKSILHGLAD EPRRPVSTTS LLVASGASEL NGKVDGYILV 240
  241 YSAVPELNHI GGPPEYGDDV MNTDTENVSD GGFELLKVIR NCILDAWTEF RNYEKRWEEG 300
  301 KEDDIYSLVY SLRHLWSKNS KEKSAKIEQL RSYNTKLKSI ELDPSSPDSP PPCIIVCSHV 360
  361 NHELASPMLI EMGRQLATKW KYGFVGIDSM DDLNVDVAVS LLIKEISEKM KLLVSNSNGS 420
  421 SSSGNSSSIY NSHLMNDKKK NNNAGLNKNM LKKIIK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle