YRC Public Data Repository - Protein Structure Prediction

Protein:	MAK3
Organism:	Saccharomyces cerevisiae
Length:	176 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAK3.

Description	E-value	Query Range	Subject Range
gi\|33871453 - gi\|33871453\|gb\|AAH04552.2\| ARD1B protein [Homo sapiens]	3.0E-41	[1..172]	[47..213]
gi\|148677471, gi... - gi\|30519923\|ref\|NP_848719.1\| hypothetical protein LOC28062 [Mus musculus], gi\|16507923\|gb\|AAH14770.1... tr\|M0R635\|M0R635_RAT - Protein LOC100909833 OS=Rattus norvegicus GN=LOC100909833 PE=4 SV=1	1.0E-40	[1..173]	[1..168]
gi\|182890674, gi... - gi\|47086985\|ref\|NP_998499.1\| alpha-N-acetyltransferase 1A [Danio rerio], gi\|31419462\|gb\|AAH53180.1\| ...	1.0E-37	[1..173]	[1..164]
gi\|147901790, gi... - gi\|28422354\|gb\|AAH44094.1\| Ard1-prov protein [Xenopus laevis], gi\|147901790\|ref\|NP_001080491.1\| N-ac...	3.0E-37	[1..165]	[1..158]
gi\|162459719, gi... - gi\|162459719\|ref\|NP_001105068.1\| silencing group B protein [Zea mays], gi\|14550116\|gb\|AAK67148.1\|AF3...	1.0E-36	[3..165]	[2..159]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	7.0E-36	[1..157]	[2..147]
NAA30_YEAST - N-alpha-acetyltransferase 30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK3 PE=1 S... MAK3 - Catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRN...	4.0E-34	[1..176]	[1..176]

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Predicted Domain #1

Region A:
Residues: [1-176]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIVYKPLDI RNEEQFASIK KLIDADLSEP YSIYVYRYFL NQWPELTYIA VDNKSGTPNI  60
   61 PIGCIVCKMD PHRNVRLRGY IGMLAVESTY RGHGIAKKLV EIAIDKMQRE HCDEIMLETE 120
  121 VENSAALNLY EGMGFIRMKR MFRYYLNEGD AFKLILPLTE KSCTRSTFLM HGRLAT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	10.69897
Match:	1mk4A_
Description:	Hypothetical protein YqiY
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits