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View Structure Prediction Details

Protein: OPI11
Organism: Saccharomyces cerevisiae
Length: 117 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for OPI11.

Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFIHIIKIK SSFNHFSQSS DGRSNGGGSS SGDSVSTTSD GLLTTGTSPN TSSTSLDGLL  60
   61 TTERTIVSSV LLDFQLLDLS SQRGTITDTV LTSDTNLLSS FSPVFKKEKI SKYVSKS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.614 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.598 d.58.7 RNA-binding domain, RBD
View Download 0.598 d.58.7 RNA-binding domain, RBD
View Download 0.586 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.545 d.74.5 Hypothetical protein Yml108w
View Download 0.545 d.263.1 Description not found.
View Download 0.538 d.57.1 DNA damage-inducible protein DinI
View Download 0.538 d.57.1 DNA damage-inducible protein DinI
View Download 0.522 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.506 d.58.26 GHMP Kinase, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle