| Protein: | TIF5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 405 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIF5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..392] | [1..392] |
|
|
0.0 | [1..395] | [1..383] |
|
|
0.0 | [1..395] | [1..381] |
|
|
0.0 | [1..395] | [1..385] |
|
|
0.0 | [2..395] | [3..408] |
|
|
0.0 | [1..395] | [1..385] |
|
|
0.0 | [1..393] | [1..376] |
|
|
1.0E-94 | [2..392] | [3..374] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MSINICRDNH DPFYRYKMPP IQAKVEGRGN GIKTAVLNVA DISHALNRPA PYIVKYFGFE 60
61 LGAQTSISVD KDRYLVNGVH EPAKLQDVLD GFINK
|
| Detection Method: |  |
| Confidence: | 8.154902 |
| Match: | 1k8bA_ |
| Description: | Zinc-binding domain of translation initiation factor 2 beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [96-133] |
1 11 21 31 41 51
| | | | | |
1 FVLCGSCKNP ETEIIITKDN DLVRDCKACG KRTPMDLR
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1k81A_ |
| Description: | Zinc-binding domain of translation initiation factor 2 beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [134-281] |
1 11 21 31 41 51
| | | | | |
1 HKLSSFILKN PPDSVSGSKK KKKAATASAN VRGGGLSISD IAQGKSQNAP SDGTGSSTPQ 60
61 HHDEDEDELS RQIKAAASTL EDIEVKDDEW AVDMSEEAIR ARAKELEVNS ELTQLDEYGE 120
121 WILEQAGEDK ENLPSDVELY KKAAELDV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.240 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.260 | N/A | N/A | b.82.2 | Clavaminate synthase-like |
| View | Download | 0.232 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.336 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.229 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.218 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.213 | N/A | N/A | a.75.1 | Ribosomal protein S7 |
|
Region A: Residues: [282-405] |
1 11 21 31 41 51
| | | | | |
1 LNDPKIGCVL AQCLFDEDIV NEIAEHNAFF TKILVTPEYE KNFMGGIERF LGLEHKDLIP 60
61 LLPKILVQLY NNDIISEEEI MRFGTKSSKK FVPKEVSKKV RRAAKPFITW LETAESDDDE 120
121 EDDE
|
| Detection Method: | |
| Confidence: | 36.119186 |
| Match: | PF02020 |
| Description: | eIF4-gamma/eIF5/eIF2-epsilon |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
