YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TIP41
Organism: Saccharomyces cerevisiae
Length: 356 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIP41.

Description E-value Query
Range
Subject
Range
gi|151942828 - gi|151942828|gb|EDN61174.1| Tap42 interacting protein [Saccharomyces cerevisiae YJM789]
TIP41_YEAST - Type 2A phosphatase activator TIP41 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIP4...
TIP41 - Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2...
gi|190407983 - gi|190407983|gb|EDV11248.1| hypothetical protein SCRG_02529 [Saccharomyces cerevisiae RM11-1a]
0.0 [1..356] [1..356]
TIPRL_MOUSE - TIP41-like protein OS=Mus musculus GN=Tiprl PE=1 SV=1
1.0E-99 [91..356] [12..254]
gi|55588696 - gi|55588696|ref|XP_513978.1| PREDICTED: hypothetical protein XP_513978 [Pan troglodytes]
TIPRL - TIP41, TOR signaling pathway regulator-like (S. cerevisiae)
2.0E-99 [90..356] [11..254]
gi|20259225, gi|... - gi|22329154|ref|NP_195153.2| TIP41-like family protein [Arabidopsis thaliana], gi|20259225|gb|AAM143...
6.0E-89 [76..354] [9..284]
gi|50918913, gi|... - gi|50918913|ref|XP_469853.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|222625840|...
gi|218193793 - gi|218193793|gb|EEC76220.1| hypothetical protein OsI_13623 [Oryza sativa Indica Group]
4.0E-87 [77..354] [16..286]
gi|220947532, gi... - gi|220956916|gb|ACL91001.1| CG9578-PA [synthetic construct], gi|220947532|gb|ACL86309.1| CG9578-PA [...
CG9578-PA - This gene is referred to in FlyBase by the symbol Dmel\CG9578 (CG9578, FBgn0031094). It is a protein...
5.0E-84 [85..356] [11..271]
tip41 - TIP41-like type 2a phosphatase regulator Tip41
TIP41_SCHPO - Type 2A phosphatase activator tip41 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tip41 ...
3.0E-81 [86..356] [1..252]
gi|28918321, gi|... - gi|32403164|ref|XP_322195.1| hypothetical protein [Neurospora crassa], gi|28918321|gb|EAA27997.1| hy...
gi|85084006 - gi|85084006|ref|XP_957233.1| hypothetical protein [Neurospora crassa OR74A]
8.0E-81 [78..354] [17..288]
CE29650 - WBGene00022803 status:Partially_confirmed SW:P34274 protein_id:AAL00884.2
5.0E-76 [81..348] [161..415]

Back

Predicted Domain #1
Region A:
Residues: [1-54]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRNTPPLR SSGINTIQIN AAREMHAQTV RARRMPMPTS GITTPSVQPT AAPA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [55-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPPRHICNNP NNPQCLHCGS VIIPSPRATL PLEDNPSISI NDWTISSRKK PILNSQELDI  60
   61 WENEKLKGLT LPEMIFGNNY IRIENSKQHW SIEFNALDAL KEVQLQDSGI RVAYSNDWIN 120
  121 SKKRQNSTNG AQRFTNDVND DSLNIIHKYD WTYTTRYKGT ESSPESKFRL DNDQKLPLDK 180
  181 LAVHDKILFY DDMILFEDEL ADNGISILNV KIRVMNERLL LLSRFFLRVD DVLVRVYDTR 240
  241 IYVEF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [300-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DENVVIRESK EFEGKYQDVL AKHRLSQSHD PKAALRDSNW VAQNTPMIKR QCEIIQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle