YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YPR039W
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for YPR039W.

Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFDYLFHP FVPCTICPDF PLYKSPAFPS SCLHHPRLLF NDKAFCPLFL VPFPASFTRW  60
   61 LTFLFHLVIY NNKMHHHTYA PHIHDLRAAL DTTAPQKKCP KETLHRSDHQ G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.597 a.118.8 TPR-like
View Download 0.597 a.118.8 TPR-like
View Download 0.554 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.554 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.529 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.529 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.485 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.420 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.409 a.1.1 Globin-like
View Download 0.369 a.118.8 TPR-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle