YRC Public Data Repository - Protein Structure Prediction

Protein:	YPR011C
Organism:	Saccharomyces cerevisiae
Length:	326 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPR011C.

Description	E-value	Query Range	Subject Range
gi\|194044922 - gi\|194044922\|ref\|XP_001927475.1\| PREDICTED: similar to adenine nucleotide translocator 2 [Sus scrofa... gi\|186886456, gi... - gi\|187936981\|ref\|NP_001120751.1\| solute carrier family 25 (mitochondrial carrier; adenine nucleotide... ADT2_BOVIN - ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3	2.0E-99	[16..322]	[2..297]
gi\|2772564, gi\|1... - gi\|2772564\|gb\|AAB96347.1\| ADP/ATP carrier protein (adenine nucleotide translocator 2) [Homo sapiens]...	5.0E-99	[16..322]	[2..297]
ADT2_MOUSE - ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3	8.0E-99	[16..322]	[2..297]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	4.0E-98	[16..322]	[2..297]
gi\|4115756, gi\|4... - gi\|4115761\|dbj\|BAA36510.1\| ADP/ATP translocase [Rana rugosa], gi\|4115756\|dbj\|BAA36509.1\| ADP/ATP tra...	5.0E-98	[16..323]	[2..298]

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Predicted Domain #1

Region A:
Residues: [1-117]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVLTVLEQ PNSIKDFLKQ DSNIAFLAGG VAGAVSRTVV SPFERVKILL QVQSSTTSYN  60
   61 RGIFSSIRQV YHEEGTKGLF RGNGLNCIRI FPYSAVQFVV YEACKKKLFH VNGNNGQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	32.920819
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [118-228]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQLTNTQRLF SGALCGGCSV VATYPLDLIK TRLSIQTANL SSLNRSKAKS ISKPPGIWQL  60
   61 LSETYRLEGG LRGLYRGVWP TSLGVVPYVA LNFAVYEQLR EFGVNSSDAQ P

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	29.552842
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [229-326]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SWKSNLYKLT IGAISGGVAQ TITYPFDLLR RRFQVLAMGG NELGFRYTSV WDALVTIGRA  60
   61 EGVSGYYKGL AANLFKVVPS TAVSWLVYEV VCDSVRNW

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	22.769551
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits