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View Structure Prediction Details

Protein: YPL278C
Organism: Saccharomyces cerevisiae
Length: 100 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL278C.

Description E-value Query
Range
Subject
Range
YOR389W - Putative protein of unknown function; expression regulated by copper levels
YO389_YEAST - Uncharacterized protein YOR389W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR389W ...
231.0 [0..1] [100..525]
gi|49643957 - gi|49643957|emb|CAG99909.1| KLLA0E19251p [Kluyveromyces lactis]
gi|50309621, gi|... - gi|50309621|ref|XP_454822.1| unnamed protein product [Kluyveromyces lactis], gi|49643957|emb|CAG9990...
83.0 [0..3] [95..559]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDNTTSSDL IKNVETARST IDGLIESLGW IELNYRCERQ CNWDEVCYTP SWGPSPMGMT  60
   61 EPGSHNEGFG THFDESRQRL VINSKLQCIN INDLMVNRNH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.640 a.74.1 Cyclin-like
View Download 0.597 a.74.1 Cyclin-like
View Download 0.501 a.74.1 Cyclin-like
View Download 0.471 a.74.1 Cyclin-like
View Download 0.468 a.39.1 EF-hand


YRC Informatics Platform - Version 3.0
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