YRC Public Data Repository - Protein Structure Prediction

Protein:	YPL257W
Organism:	Saccharomyces cerevisiae
Length:	193 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL257W.

Description	E-value	Query Range	Subject Range
YP257_YEAST - Uncharacterized membrane protein YPL257W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN... YPL257W - Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index;... gi\|207340757 - gi\|207340757\|gb\|EDZ69006.1\| YPL257Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi\|190407708 - gi\|190407708\|gb\|EDV10973.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]	2.0E-93	[1..193]	[1..193]

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Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAHANERIS DVSPSARGSS SESKYDKLCR VLFFIAITKS SFTPEHILYK HSIFTDKPIL  60
   61 ADIVTFMYAA FVSIGWFLIW GERAYRTQEM GQPPMYSNIN YHLLSFKKRH PKKFTCALWL 120
  121 VFFLAYTVLT VLIWLVQLIF RKGNVFQMLL QLIILDIAIA LVNVAIAFTF EIYLSQKAAI 180
  181 EIRDEGLNNL DTA

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits