YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ICY2
Organism: Saccharomyces cerevisiae
Length: 136 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ICY2.

Description E-value Query
Range
Subject
Range
ICY1 - Protein of unknown function, required for viability in rich media of cells lacking mitochondrial DNA...
ICY1_YEAST - Interacting with cytoskeleton protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
gi|190408421 - gi|190408421|gb|EDV11686.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
186.0 [0..1] [135..1]

Back

Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVESSPIS RYEDEVFPLS FSNVAFEPPM LSHSPDRSTY ADDFSQSYQQ ELLTFPLSYP  60
   61 IVDESECTHT KDKTDSNIIT STEDDCMFDM EFNGNAASAV AAASKESNSA SGFAFASNDA 120
  121 FANVAQQNYR LWLSSV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.592 a.1.1 Globin-like
View Download 0.592 a.1.1 Globin-like
View Download 0.549 a.1.1 Globin-like
View Download 0.549 a.1.1 Globin-like
View Download 0.450 a.1.1 Globin-like
View Download 0.429 a.25.1 Ferritin-like
View Download 0.398 d.92.1 Metalloproteases ("zincins"), catalytic domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle