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View Structure Prediction Details

Protein: YPL238C
Organism: Saccharomyces cerevisiae
Length: 129 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YPL238C.

Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELALGVPS LLSASTLSRP ALASSFSNAS TLLSFVFFFF FFKDSSPKAS AMSSVGSFSA  60
   61 SASAETLLDF FFFFFNPANK SSPEPFSLPF TAASKSSGIT FLVFFFFFSA GSNPNSAAKS 120
  121 EDISCVLII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.409 a.1.1 Globin-like
View Download 0.327 a.74.1 Cyclin-like
View Download 0.320 a.278.1 Description not found.
View Download 0.310 a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.305 a.24.9 alpha-catenin/vinculin
View Download 0.285 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.277 a.118.1 ARM repeat
View Download 0.265 a.74.1 Cyclin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle