| Protein: | SUI3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 285 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUI3.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-86 | [1..285] | [1..285] |
|
|
2.0E-70 | [29..284] | [2..268] |
|
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1.0E-68 | [28..284] | [3..268] |
|
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2.0E-68 | [1..285] | [1..328] |
|
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5.0E-68 | [1..285] | [1..326] |
|
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6.0E-68 | [1..285] | [1..328] |
|
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9.0E-68 | [1..285] | [1..328] |
|
|
3.0E-67 | [1..285] | [1..329] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MSSDLAAELG FDPALKKKKK TKKVIPDDFD AAVNGKENGS GDDLFAGLKK KKKKSKSVSA 60
61 DAEAEKEPTD DIAEALGELS LKKKKKKTKD SSVDAFEKEL AKAGLDNVDA ESKEGTPSAN 120
121 SSIQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.531 | 0.225 | ribosome | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.454 | 0.042 | translation initiation factor activity | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.565 | 0.018 | translation initiation factor activity | a.118.8 | TPR-like |
| View | Download | 0.515 | 0.006 | translation initiation factor activity | a.29.2 | Bromodomain |
| View | Download | 0.469 | 0.001 | translation initiation factor activity | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.565 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.531 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.515 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.488 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.469 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.430 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.426 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.413 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.403 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.385 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.382 | N/A | N/A | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.365 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.343 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.338 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.330 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.326 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.325 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.320 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.316 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.306 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.291 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.285 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.280 | N/A | N/A | d.15.5 | Staphylokinase/streptokinase |
| View | Download | 0.275 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.274 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.268 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.258 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.254 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.252 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.248 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.233 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.215 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.205 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.205 | N/A | N/A | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.204 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.200 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
|
Region A: Residues: [125-217] |
1 11 21 31 41 51
| | | | | |
1 QEVGLPYSEL LSRFFNILRT NNPELAGDRS GPKFRIPPPV CLRDGKKTIF SNIQDIAEKL 60
61 HRSPEHLIQY LFAELGTSGS VDGQKRLVIK GKF
|
| Detection Method: | |
| Confidence: | 11.0 |
| Match: | 1k8bA_ |
| Description: | Zinc-binding domain of translation initiation factor 2 beta |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [218-285] |
1 11 21 31 41 51
| | | | | |
1 QSKQMENVLR RYILEYVTCK TCKSINTELK REQSNRLFFM VCKSCGSTRS VSSIKTGFQA 60
61 TVGKRRRM
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| Detection Method: | |
| Confidence: | 7.69897 |
| Match: | 1k81A_ |
| Description: | Zinc-binding domain of translation initiation factor 2 beta |
Matching Structure (courtesy of the PDB): |
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