| Protein: | CBP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 335 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..335] | [1..335] |
|
|
1.0E-66 | [58..291] | [64..275] |
|
|
2.0E-57 | [115..290] | [115..277] |
|
|
2.0E-56 | [115..290] | [111..273] |
|
|
7.0E-54 | [115..290] | [16..178] |
|
|
3.0E-46 | [113..291] | [1..183] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MMSVNRFTSG RLPVFLRKSP FYYSRAYLHQ TCVFKQNKET AQDSPELLAK SSHLNSKPLD 60
61 VSNKA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.327 | a.74.1 | Cyclin-like |
| View | Download | 0.283 | a.64.1 | Saposin |
| View | Download | 0.320 | a.17.1 | p8-MTCP1 |
| View | Download | 0.287 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.513 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.279 | a.112.1 | Description not found. |
| View | Download | 0.277 | a.118.8 | TPR-like |
| View | Download | 0.257 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.249 | a.4.1 | Homeodomain-like |
| View | Download | 0.242 | a.30.1 | ROP protein |
| View | Download | 0.235 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.226 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.223 | a.65.1 | Annexin |
| View | Download | 0.215 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
|
Region A: Residues: [66-335] |
1 11 21 31 41 51
| | | | | |
1 PVKTAQNKIP LAHSKYESSK YELPKWKEAL GELVIRAFHL DMDRVRAGPV AGSYYYKICK 60
61 EQGLQYEDEP LSETAKYFYE DLKLPRTFSQ WFQITVLHEW ILFVRMRAMP FKYGRNYQQK 120
121 LVDRTFSDIE LRLFEEMKVN SGRIADQYLK DFNTQLRGAI FAYDEGFATD DGTLATAVWR 180
181 NLFGGRKNID MVHLESVVRY IYSQLYVLSR LSDREFATGK FKFVPPGVKV EKLTPKQEEE 240
241 LKAKTIAKYE ALDKDPKTLP SERSRLSYTN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
