| Protein: | LEA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 238 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEA1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-48 | [3..235] | [214..438] |
|
|
1.0E-47 | [3..236] | [122..347] |
|
|
2.0E-46 | [3..234] | [148..371] |
|
|
9.0E-44 | [11..234] | [130..351] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MKFTPSIVID APQYYVDHFN GKYNVDKCVI LRDLQLETDS ESMPSSLKHL TKPTHILDLT 60
61 NNDLIMIPDL SRRDDIHTLL LGRNNIVEVD GRLLPMNVQN LTLSNNSIRR FEDLQRLRRA 120
121 PRTLKNLTLI GNQVCHLANY REHVLRLVPH LETLDFQNVT AEERKSAMSF PRQADGDTLG 180
181 PVNTAIRDNG SRDKTMEIMN LVVSKMTVER RNELKKQLAE ATSLEEIARL EKLLSGGV
|
| Detection Method: |  |
| Confidence: | 63.751666 |
| Match: | 1a9nA_ |
| Description: | Splicesomal U2A' protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 5.06869554505412 | bayes_pls_golite062009 | |
| RNA binding | 2.76465666962243 | bayes_pls_golite062009 |
| structural molecule activity | 1.5631307925072 | bayes_pls_golite062009 |
| binding | 1.28018794783241 | bayes_pls_golite062009 |
| mRNA binding | 1.10345530526271 | bayes_pls_golite062009 |
| nucleic acid binding | 0.883701441647125 | bayes_pls_golite062009 |
