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View Structure Prediction Details

Protein: CSM4
Organism: Saccharomyces cerevisiae
Length: 156 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSM4.

Description E-value Query
Range
Subject
Range
CSM4 - Protein required for accurate chromosome segregation during meiosis; involved in meiotic telomere cl...
gi|190407762 - gi|190407762|gb|EDV11027.1| chromosome segregation in meiosis protein 4 [Saccharomyces cerevisiae RM...
CSM4_YEAST - Chromosome segregation in meiosis protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...
1.0E-74 [1..156] [1..156]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDGSITRKV TSTLSNQLAT WKWKLQLSLL ERKLATINND YFLLQWELLF ITNEVMKWKE  60
   61 MIAFLESQLF CTTQNFVAQE THDRETFQSL VDDYNKQLSE NNLIISVLKS RPQLSSFPIY 120
  121 LSDEVCSHLK FVIAELNSLI IVFFISLVFL WVSIEV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.753 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.751 a.118.1 ARM repeat
View Download 0.644 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.635 a.46.1 Methionine synthase domain
View Download 0.631 a.46.1 Methionine synthase domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle