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View Structure Prediction Details

Protein: OXR1
Organism: Saccharomyces cerevisiae
Length: 273 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OXR1.

Description E-value Query
Range
Subject
Range
gi|151942603 - gi|151942603|gb|EDN60949.1| oxidation resistance [Saccharomyces cerevisiae YJM789]
gi|190407765 - gi|190407765|gb|EDV11030.1| oxidation resistance protein 1 [Saccharomyces cerevisiae RM11-1a]
OXR1_YEAST - Oxidation resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OXR1 PE=1...
OXR1 - Protein of unknown function required for normal levels of resistance to oxidative damage, null mutan...
8.0E-78 [1..273] [1..273]
gi|20531145, gi|... - gi|42476175|ref|NP_861447.2| nuclear receptor coactivator 7 [Homo sapiens], gi|20531145|gb|AAM27392....
1.0E-62 [4..270] [727..939]
gi|40254222, gi|... - ref|NP_766083.2| RIKEN cDNA 9030406N13 [Mus musculus], gi|34536597|dbj|BAC87660.1| unnamed protein p...
1.0E-60 [4..270] [619..833]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGVKDAIFK IKRSIAGTDS SDSTAYTTAS ESSPQLKDSH NPFRNKTTSE RTIVEEGSLP  60
   61 PVRLNGYLPS TKNKLLTPEM CDEIRTLMPT RIQLY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.230 0.415 mitochondrion a.3.1 Cytochrome c
View Download 0.365 0.009 response to oxidative stress a.47.2 t-snare proteins
View Download 0.365 N/A N/A a.47.2 t-snare proteins
View Download 0.230 N/A N/A a.3.1 Cytochrome c

Predicted Domain #2
Region A:
Residues: [96-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEWNLLYSLE QHGSSLHSLY SNVAPDSKEF RRVGYVLVIK DRKNGIFGAY SNEAFHPNEH  60
   61 RQYTGNGECF LWKLDKVPDV NISEKEESEQ EGKEGKEEGD KEERWRFSGY PYTGVNEFAI 120
  121 YCTSEFLSMG AGDGHYGLLC DDGLLHGVSN PCQTYGNEVL SKEGKKFSIV ALEVWRVG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle