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View Structure Prediction Details

Protein: MF(ALPHA)1
Organism: Saccharomyces cerevisiae
Length: 165 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MF(ALPHA)1.

Description E-value Query
Range
Subject
Range
MFAL1_YEAST - Mating factor alpha-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MF(ALPHA)1 PE=1 SV...
MF(ALPHA)1 - Mating pheromone alpha-factor, made by alpha cells; interacts with mating type a cells to induce cel...
1.0E-79 [1..165] [1..165]
MFA1_SACBA - Mating factor alpha OS=Saccharomyces bayanus PE=4 SV=1
MFA1_SACUV - Mating factor alpha OS=Saccharomyces uvarum PE=4 SV=1
5.0E-68 [1..144] [1..144]
gi|24940448, gi|... - gi|24940450|emb|CAD56324.1| alpha-pheromone [Saccharomyces paradoxus], gi|24940448|emb|CAD56323.1| a...
6.0E-64 [1..165] [1..177]
gi|27948829 - gi|27948829|gb|AAO25615.1| mating pheromone alpha2 [Kluyveromyces delphensis]
1.0E-61 [1..165] [1..168]
gi|50288999, gi|... - gi|50288999|ref|XP_446929.1| unnamed protein product [Candida glabrata], gi|49526238|emb|CAG59862.1|...
gi|49526238, gi|... - gi|49526238|emb|CAG59862.1| unnamed protein product [Candida glabrata], gi|27948823|gb|AAO25610.1| m...
3.0E-49 [1..144] [1..159]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPSIFTAV LFAASSALAA PVNTTTEDET AQIPAEAVIG YLDLEGDFDV AVLPFSNSTN  60
   61 NGLLFINTTI ASIAAKEEGV SLDKREAEAW HWLQLKPGQP MYKREAEAEA WHWLQLKPGQ 120
  121 PMYKREADAE AWHWLQLKPG QPMYKREADA EAWHWLQLKP GQPMY

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle