| Protein: | CTI6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 506 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTI6.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-62 | [4..490] | [4376..4886] |
|
|
2.0E-52 | [1..506] | [1..506] |
|
|
2.0E-44 | [195..495] | [8..340] |
|
|
1.0E-43 | [2..467] | [22..470] |
|
|
1.0E-42 | [5..483] | [547..1024] |
|
|
2.0E-41 | [2..486] | [487..968] |
|
|
4.0E-41 | [140..495] | [7..405] |
|
|
7.0E-40 | [7..473] | [477..936] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MESTAIVPKG PVVGSEDMEK AEVIASGSTD IISTTSTATT TAAIGSVQEE SVKQEDVPME 60
61 GGEGEVEE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.281 | 0.856 | positive regulation of transcription | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.281 | 0.856 | positive regulation of transcription | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.351 | 0.856 | positive regulation of transcription | b.5.1 | alpha-Amylase inhibitor tendamistat |
| View | Download | 0.279 | 0.856 | positive regulation of transcription | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.280 | 0.856 | positive regulation of transcription | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.277 | 0.856 | positive regulation of transcription | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.267 | 0.856 | positive regulation of transcription | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.263 | 0.856 | positive regulation of transcription | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.220 | 0.856 | positive regulation of transcription | d.58.5 | GlnB-like |
| View | Download | 0.217 | 0.856 | positive regulation of transcription | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
|
Region A: Residues: [69-127] |
1 11 21 31 41 51
| | | | | |
1 EEGETRCICG ELDTPDDSGF FIQCEQCSSW QHGYCVSITQ DNAPDKYWCE QCRPELHQL
|
| Detection Method: | |
| Confidence: | 14.455932 |
| Match: | PF00628 |
| Description: | PHD-finger |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [128-506] |
1 11 21 31 41 51
| | | | | |
1 FTTDTGEARS IYKPVQEKRR QSRRKARSAA ASKSHAANEA EKSPRNTSNT DDNVDDIGDE 60
61 EDEVEDEASA VALAKDGNTR SSRRRRRNSM DDASTDQYSL DPGDSDKKLL DRKRATFMAR 120
121 EEKQYQRMLE KALKESRRTS HQEDPESYEN DADIYQGDTD NHNGTTRLQT DVMLTEGKPD 180
181 SVTNDDMKES LRPSKEQSME KTNDVEKEAS QEKESSTGSA QDTEKTDEPI LPLTSISSSE 240
241 DDSRKASSRG SKRVSKPARK GNRTRRSNTS SDTNQNRRSA DIGTDKPVKP RLPPQRTSLN 300
301 EMRRRVSAIL EFISRTQWEL SEDQSDREEF VRFVENQHFV EKVDTIYNGY NESLSMMDDL 360
361 TRELLLWEKK YSNNTNAIQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [421-506] |
1 11 21 31 41 51
| | | | | |
1 PQRTSLNEMR RRVSAILEFI SRTQWELSED QSDREEFVRF VENQHFVEKV DTIYNGYNES 60
61 LSMMDDLTRE LLLWEKKYSN NTNAIQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.899 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.672 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.597 | a.112.1 | Description not found. |
| View | Download | 0.587 | a.7.7 | BAG domain |
| View | Download | 0.571 | a.47.2 | t-snare proteins |
