Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NIP100.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [42..814] | [859..1618] |
|
|
0.0 | [35..814] | [852..1618] |
|
|
0.0 | [35..814] | [855..1621] |
|
|
0.0 | [42..850] | [862..1656] |
|
|
0.0 | [35..814] | [856..1622] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MRNAGVQVDT NMQKISLQDT VLVNEMKGRV KFIGETQFAK GIWYGIELDK PLGKNDGSAN 60
61 GIRYFDIDLK KANSNGGYYG LFCKKDTLQF YKPDDDEHSL LNGNAAQETI KNLQVKCESL 120
121 ASKLNKIKIE NHELKTSVEK LSTNETVLLS KISRLDKLVK ELKVENGNMK THLDNFNHLL 180
181 DASDSVMAPD LDKGTLLERS HLLQGLLDQT KLSYDKAMKV QEDLLEENTQ LLEENAVLSK 240
241 KISDLGLQLQ QTNNTIGDLA LQIEAQSKSS NIVDKLTNDN ILLTSNIKAL NNELEELQAK 300
301 EKLDENLRIT YEQLEQELRL QLSNLQSALE NEKEIAGTYI EE
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [343-445] |
1 11 21 31 41 51
| | | | | |
1 NSRLKATLES IEAKTSHKFQ SLELKVNTLQ EELYQNKLLK KFYQIYEPFA QPHLAALSSQ 60
61 LQYLAEVIES ENFGKLENIE IHIILKVLSS ISYALHIYTI KNT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.699 | 0.026 | microtubule binding | a.47.2 | t-snare proteins |
| View | Download | 0.609 | 0.026 | microtubule binding | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.755 | 0.026 | microtubule binding | a.24.4 | Hemerythrin |
| View | Download | 0.801 | 0.026 | microtubule binding | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.670 | 0.026 | microtubule binding | d.164.1 | SMAD MH1 domain |
| View | Download | 0.608 | 0.026 | microtubule binding | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.586 | 0.026 | microtubule binding | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.582 | 0.026 | microtubule binding | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.578 | 0.026 | microtubule binding | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.578 | 0.026 | microtubule binding | c.55.3 | Ribonuclease H-like |
| View | Download | 0.572 | 0.026 | microtubule binding | a.118.8 | TPR-like |
| View | Download | 0.570 | 0.026 | microtubule binding | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.564 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.561 | 0.026 | microtubule binding | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.551 | 0.026 | microtubule binding | a.74.1 | Cyclin-like |
| View | Download | 0.543 | 0.026 | microtubule binding | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.541 | 0.026 | microtubule binding | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.539 | 0.026 | microtubule binding | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.537 | 0.026 | microtubule binding | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.537 | 0.026 | microtubule binding | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.520 | 0.026 | microtubule binding | a.47.2 | t-snare proteins |
| View | Download | 0.519 | 0.026 | microtubule binding | a.29.2 | Bromodomain |
| View | Download | 0.516 | 0.026 | microtubule binding | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.516 | 0.026 | microtubule binding | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.511 | 0.026 | microtubule binding | a.118.1 | ARM repeat |
| View | Download | 0.502 | 0.026 | microtubule binding | a.39.1 | EF-hand |
| View | Download | 0.498 | 0.026 | microtubule binding | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.493 | 0.026 | microtubule binding | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.489 | 0.026 | microtubule binding | a.7.1 | Spectrin repeat |
| View | Download | 0.484 | 0.026 | microtubule binding | a.46.1 | Methionine synthase domain |
| View | Download | 0.481 | 0.026 | microtubule binding | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.480 | 0.026 | microtubule binding | d.13.1 | HIT-like |
| View | Download | 0.477 | 0.026 | microtubule binding | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.475 | 0.026 | microtubule binding | a.7.7 | BAG domain |
| View | Download | 0.471 | 0.026 | microtubule binding | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.464 | 0.026 | microtubule binding | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.461 | 0.026 | microtubule binding | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.454 | 0.026 | microtubule binding | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.448 | 0.026 | microtubule binding | a.47.2 | t-snare proteins |
| View | Download | 0.444 | 0.026 | microtubule binding | a.24.3 | Cytochromes |
| View | Download | 0.443 | 0.026 | microtubule binding | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.440 | 0.026 | microtubule binding | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.429 | 0.026 | microtubule binding | a.19.1 | Fertilization protein |
| View | Download | 0.423 | 0.026 | microtubule binding | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.419 | 0.026 | microtubule binding | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.415 | 0.026 | microtubule binding | a.7.1 | Spectrin repeat |
| View | Download | 0.413 | 0.026 | microtubule binding | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.411 | 0.026 | microtubule binding | a.74.1 | Cyclin-like |
| View | Download | 0.409 | 0.026 | microtubule binding | a.74.1 | Cyclin-like |
| View | Download | 0.399 | 0.026 | microtubule binding | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.391 | 0.026 | microtubule binding | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.389 | 0.026 | microtubule binding | a.29.2 | Bromodomain |
| View | Download | 0.387 | 0.026 | microtubule binding | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.385 | 0.026 | microtubule binding | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.382 | 0.026 | microtubule binding | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.379 | 0.026 | microtubule binding | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.377 | 0.026 | microtubule binding | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.376 | 0.026 | microtubule binding | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.374 | 0.026 | microtubule binding | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.372 | 0.026 | microtubule binding | a.74.1 | Cyclin-like |
| View | Download | 0.372 | 0.026 | microtubule binding | a.7.1 | Spectrin repeat |
| View | Download | 0.371 | 0.026 | microtubule binding | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.366 | 0.026 | microtubule binding | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.366 | 0.026 | microtubule binding | a.22.1 | Histone-fold |
| View | Download | 0.365 | 0.026 | microtubule binding | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.361 | 0.026 | microtubule binding | d.44.1 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| View | Download | 0.361 | 0.026 | microtubule binding | a.39.1 | EF-hand |
| View | Download | 0.360 | 0.026 | microtubule binding | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.360 | 0.026 | microtubule binding | a.174.1 | Double Clp-N motif |
| View | Download | 0.360 | 0.026 | microtubule binding | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.357 | 0.026 | microtubule binding | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.354 | 0.026 | microtubule binding | a.7.8 | GAT domain |
| View | Download | 0.353 | 0.026 | microtubule binding | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.347 | 0.026 | microtubule binding | a.77.1 | DEATH domain |
| View | Download | 0.347 | 0.026 | microtubule binding | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.346 | 0.026 | microtubule binding | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.345 | 0.026 | microtubule binding | a.26.1 | 4-helical cytokines |
| View | Download | 0.343 | 0.026 | microtubule binding | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.337 | 0.026 | microtubule binding | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.335 | 0.026 | microtubule binding | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.334 | 0.026 | microtubule binding | a.39.1 | EF-hand |
| View | Download | 0.333 | 0.026 | microtubule binding | a.112.1 | Description not found. |
| View | Download | 0.330 | 0.026 | microtubule binding | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.323 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.320 | 0.026 | microtubule binding | a.25.1 | Ferritin-like |
| View | Download | 0.318 | 0.026 | microtubule binding | a.158.1 | F-box domain |
| View | Download | 0.318 | 0.026 | microtubule binding | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.317 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.316 | 0.026 | microtubule binding | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.308 | 0.026 | microtubule binding | a.23.2 | Diol dehydratase, gamma subunit |
| View | Download | 0.307 | 0.026 | microtubule binding | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.303 | 0.026 | microtubule binding | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.300 | 0.026 | microtubule binding | a.25.1 | Ferritin-like |
| View | Download | 0.298 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.296 | 0.026 | microtubule binding | a.130.1 | Chorismate mutase II |
| View | Download | 0.296 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.294 | 0.026 | microtubule binding | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.292 | 0.026 | microtubule binding | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.291 | 0.026 | microtubule binding | a.134.1 | Fungal elicitin |
| View | Download | 0.286 | 0.026 | microtubule binding | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.285 | 0.026 | microtubule binding | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.284 | 0.026 | microtubule binding | d.13.1 | HIT-like |
| View | Download | 0.280 | 0.026 | microtubule binding | a.77.1 | DEATH domain |
| View | Download | 0.278 | 0.026 | microtubule binding | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.274 | 0.026 | microtubule binding | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.272 | 0.026 | microtubule binding | a.3.1 | Cytochrome c |
| View | Download | 0.270 | 0.026 | microtubule binding | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.270 | 0.026 | microtubule binding | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.268 | 0.026 | microtubule binding | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.266 | 0.026 | microtubule binding | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.264 | 0.026 | microtubule binding | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.258 | 0.026 | microtubule binding | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.257 | 0.026 | microtubule binding | a.77.1 | DEATH domain |
| View | Download | 0.256 | 0.026 | microtubule binding | a.26.1 | 4-helical cytokines |
| View | Download | 0.255 | 0.026 | microtubule binding | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.243 | 0.026 | microtubule binding | d.42.1 | POZ domain |
| View | Download | 0.241 | 0.026 | microtubule binding | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.239 | 0.026 | microtubule binding | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.236 | 0.026 | microtubule binding | d.195.1 | YopH tyrosine phosphatase N-terminal domain |
| View | Download | 0.236 | 0.026 | microtubule binding | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.235 | 0.026 | microtubule binding | a.63.1 | Apolipophorin-III |
| View | Download | 0.231 | 0.026 | microtubule binding | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.230 | 0.026 | microtubule binding | a.135.1 | Tetraspanin |
| View | Download | 0.229 | 0.026 | microtubule binding | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.229 | 0.026 | microtubule binding | a.24.11 | Bacterial GAP domain |
| View | Download | 0.227 | 0.026 | microtubule binding | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.226 | 0.026 | microtubule binding | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.221 | 0.026 | microtubule binding | a.30.1 | ROP protein |
| View | Download | 0.220 | 0.026 | microtubule binding | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.218 | 0.026 | microtubule binding | a.39.1 | EF-hand |
| View | Download | 0.217 | 0.026 | microtubule binding | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.214 | 0.026 | microtubule binding | a.74.1 | Cyclin-like |
| View | Download | 0.210 | 0.026 | microtubule binding | c.23.1 | CheY-like |
| View | Download | 0.209 | 0.026 | microtubule binding | a.39.3 | Cloroperoxidase |
| View | Download | 0.208 | 0.026 | microtubule binding | a.24.3 | Cytochromes |
| View | Download | 0.206 | 0.026 | microtubule binding | a.24.3 | Cytochromes |
| View | Download | 0.205 | 0.026 | microtubule binding | a.1.1 | Globin-like |
| View | Download | 0.205 | 0.026 | microtubule binding | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.205 | 0.026 | microtubule binding | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.203 | 0.026 | microtubule binding | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.202 | 0.026 | microtubule binding | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.201 | 0.026 | microtubule binding | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.200 | 0.026 | microtubule binding | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
|
Region A: Residues: [446-562] |
1 11 21 31 41 51
| | | | | |
1 PDHLETTLQC FKVNIAPISM WLSEFLQRKF SSKQETAFSI CQFLEDNKFL DKDVTLILKI 60
61 LHPILETTVP KLLAFLRTNS NFNDNDTLCL IGSLYERSLS LIARIDKLIG KEEISKQ
|
| Detection Method: | |
| Confidence: | 8.221849 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [563-790] |
1 11 21 31 41 51
| | | | | |
1 DNRLFLYPSC DITLSSILTI LFSDALFLRQ DYKRISSLKK LEVFFQGIES LLENITIFPE 60
61 QPSQQTSDSE SQCNIKEGNF SNSLLSDRLN EENIRLKEVL VQKENMLTEL ETKIKIIIGR 120
121 DLERKTLEEN IKTLKVELNN KNEENCGKTE ILNKLKEENF NLVNRLKNME LKLYQIKDNN 180
181 TLNKIYLDRE KVDRVNLVSE IMELRETIRR QIKEQKRVSI DFSWLDEL
|
| Detection Method: | |
| Confidence: | 8.221849 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [791-868] |
1 11 21 31 41 51
| | | | | |
1 PAVENKQPFK EHINHSLDTL GIEMFNFVST SRILDLKLDQ PLAEDELWHE RDHSYISYLK 60
61 RKRKNIRLKS QNVVTYYK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.474 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.576 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.420 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.387 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.353 | d.58.25 | Killer toxin KP6 alpha-subunit |
| View | Download | 0.318 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.309 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.302 | a.28.1 | ACP-like |
| View | Download | 0.298 | d.58.17 | Metal-binding domain |
| View | Download | 0.291 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.289 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.286 | b.4.1 | HSP40/DnaJ peptide-binding domain |
| View | Download | 0.273 | a.77.1 | DEATH domain |
| View | Download | 0.262 | a.5.2 | UBA-like |
| View | Download | 0.247 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.246 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.237 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.233 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.233 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.229 | a.46.1 | Methionine synthase domain |
| View | Download | 0.228 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.222 | a.112.1 | Description not found. |
| View | Download | 0.214 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.212 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | a.60.9 | lambda integrase-like, N-terminal domain |
