| Protein: | KIP2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 706 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIP2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..706] | [1..706] |
|
|
0.0 | [100..633] | [12..491] |
|
|
0.0 | [92..705] | [4..570] |
|
|
0.0 | [99..641] | [2..472] |
|
|
0.0 | [101..599] | [2..450] |
|
|
0.0 | [100..616] | [11..483] |
|
|
0.0 | [102..705] | [10..568] |
|
Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MIQKMSPSLR RPSTRSSSGS SNIPQSPSVR STSSFSNLTR NSIRSTSNSG SQSISASSTR 60
61 SNSPLRSVSA K
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.622 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.530 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.469 | a.65.1 | Annexin |
| View | Download | 0.402 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.352 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.351 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.344 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.340 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.337 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.330 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.312 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.299 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.287 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.281 | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.270 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.262 | a.77.1 | DEATH domain |
| View | Download | 0.245 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.233 | a.4.1 | Homeodomain-like |
| View | Download | 0.228 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.227 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.215 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.209 | a.46.1 | Methionine synthase domain |
| View | Download | 0.204 | a.39.1 | EF-hand |
|
Region A: Residues: [72-507] |
1 11 21 31 41 51
| | | | | |
1 SDPFLHPGRI RIRRSDSINN NSRKNDTYTG SITVTIRPKP RSVGTSRDHV GLKSPRYSQP 60
61 RSNSHHGSNT FVRDPWFITN DKTIVHEEIG EFKFDHVFAS HCTNLEVYER TSKPMIDKLL 120
121 MGFNATIFAY GMTGSGKTFT MSGNEQELGL IPLSVSYLFT NIMEQSMNGD KKFDVIISYL 180
181 EIYNERIYDL LESGLEESGS RISTPSRLYM SKSNSNGLGV ELKIRDDSQY GVKVIGLTER 240
241 RCESSEELLR WIAVGDKSRK IGETDYNARS SRSHAIVLIR LTSTNVKNGT SRSSTLSLCD 300
301 LAGSERATGQ QERRKEGSFI NKSLLALGTV ISKLSADKMN SVGSNIPSPS ASGSSSSSGN 360
361 ATNNGTSPSN HIPYRDSKLT RLLQPALSGD SIVTTICTVD TRNDAAAETM NTLRFASRAK 420
421 NVALHVSKKS IISNGN
|
| Detection Method: | |
| Confidence: | 562.228787 |
| Match: | 1gojA_ |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [508-706] |
1 11 21 31 41 51
| | | | | |
1 NDGDKDRTIE LLRRQLEEQR RMISELKNRS NIGEPLTKSS NESTYKDIKA TGNDGDPNLA 60
61 LMRAENRVLK YKLENCEKLL DKDVVDLQDS EIMEIVEMLP FEVGTLLETK FQGLESQIRQ 120
121 YRKYTQKLED KIMALEKSGH TAMSLTGCDG TEVIELQKML ERKDKMIEAL QSAKRLRDRA 180
181 LKPLINTQQS PHPVVDNDK
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
