YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RRD2
Organism: Saccharomyces cerevisiae
Length: 358 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRD2.

Description E-value Query
Range
Subject
Range
RRD2 - Activator of the phosphotyrosyl phosphatase activity of PP2A,peptidyl-prolyl cis/trans-isomerase; re...
gi|190407809 - gi|190407809|gb|EDV11074.1| hypothetical protein SCRG_02345 [Saccharomyces cerevisiae RM11-1a]
PTPA2_YEAST - Serine/threonine-protein phosphatase 2A activator 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 ...
0.0 [1..358] [1..358]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [1..304] [24..322]
gi|29725611, gi|... - gi|55958028|emb|CAI12874.1| protein phosphatase 2A activator, regulatory subunit 4 [Homo sapiens], g...
gi|114627101, gi... - gi|114627101|ref|XP_001163493.1| PREDICTED: protein phosphatase 2A, regulatory subunit B' isoform 9 ...
gi|123982678, gi... - gi|61362055|gb|AAX42151.1| protein phosphatase 2A regulatory subunit B' [synthetic construct], gi|12...
0.0 [1..304] [24..322]
PTPA_RABIT - Serine/threonine-protein phosphatase 2A activator OS=Oryctolagus cuniculus GN=PPP2R4 PE=1 SV=1
0.0 [1..304] [24..322]
PTPA_MOUSE - Serine/threonine-protein phosphatase 2A activator OS=Mus musculus GN=Ppp2r4 PE=1 SV=1
0.0 [1..304] [24..322]
PTPA2_NEUCR - Serine/threonine-protein phosphatase 2A activator 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2...
PTPA2_NEUCR - Serine/threonine-protein phosphatase 2A activator 2 OS=Neurospora crassa GN=rrd-2 PE=3 SV=1
0.0 [3..358] [78..449]

Back

Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPEKRLLTP DDMKLWEESP TRAHFTKFII DLAESVKGHE NSQYKEPISE SINSMMNLLS  60
   61 QIKDITQKHP VIKDADSSRF GKVEFRDFYD EVSRNSRKIL RSEFPSLTDE QLEQLSIYLD 120
  121 ESWGNKRRID YGSGHELNFM CLLYGLYSYG IFNLSNDSTN LVLKVFIEYL KIMRILETKY 180
  181 WLEPAGSHGV WGLDDYHFLP FLFGAFQLTT HKHLKPISIH NNELVEMFAH RYLYFGCIAF 240
  241 INKVKSSASL RWHSPMLDDI SGVKTWSKVA EGMIKMYKAE VLSKLPIMQH FYFSEFLPCP 300
  301 DGVSPPRGHI HDGTDKDDEC NFEGHVHTTW GDCCGIKLPS AIAATEMNKK HHKPIPFD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 194.744727
Match: PF03095
Description: Phosphotyrosyl phosphate activator (PTPA) protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
protein phosphatase 2A binding 8.91440374532471 bayes_pls_golite062009
protein phosphatase type 2A regulator activity 8.6639960888548 bayes_pls_golite062009
phosphatase activator activity 8.3056988507343 bayes_pls_golite062009
protein tyrosine phosphatase activator activity 8.25208483660706 bayes_pls_golite062009
phosphatase regulator activity 6.19500533578098 bayes_pls_golite062009
protein phosphatase regulator activity 6.15684302555811 bayes_pls_golite062009
hydrolase activity 2.45059495047304 bayes_pls_golite062009
protein phosphatase binding 2.00937322119814 bayes_pls_golite062009
phosphatase binding 1.91058768875586 bayes_pls_golite062009
binding 1.8791829282582 bayes_pls_golite062009
enzyme regulator activity 1.7601888817048 bayes_pls_golite062009
protein binding 1.54296590753075 bayes_pls_golite062009
enzyme binding 0.93814259527019 bayes_pls_golite062009
enzyme activator activity 0.877491580866805 bayes_pls_golite062009
protein dimerization activity 0.382201469725949 bayes_pls_golite062009
catalytic activity 0.262417313750414 bayes_pls_golite062009
receptor binding 0.23629695620438 bayes_pls_golite062009
protein homodimerization activity 0.0723700055105033 bayes_pls_golite062009
ATP binding 0.00395016899365508 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle