| Protein: | MKK2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 506 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MKK2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..506] | [1..506] |
|
|
0.0 | [17..503] | [92..541] |
|
|
0.0 | [17..503] | [92..541] |
|
|
0.0 | [17..503] | [92..541] |
|
|
0.0 | [18..503] | [108..561] |
|
|
0.0 | [17..503] | [92..541] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MASMFRPPES NRSHQKTPKL TLPVNLVQNA KSTNDGQHLN RSPYSSVNES PYSNNSTSAT 60
61 STTSSMASNS TLLYNRS
|
| Detection Method: |  |
| Confidence: | 2.69897 |
| Match: | 1f3mA_ |
| Description: | pak1 autoregulatory domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [78-170] |
1 11 21 31 41 51
| | | | | |
1 STTTIKNRPV PPPLPPLVLT QKKDGIEYRV AGDSQLSERF SNLHVDITYK ELLSSAPIST 60
61 KLSNIDTTFI KKDLDTPEGE DSYPSTLLSA YDF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.406 | b.36.1 | PDZ domain-like |
| View | Download | 0.376 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.313 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.406 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.293 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.276 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.272 | a.158.1 | F-box domain |
| View | Download | 0.269 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.267 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.241 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.231 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.225 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.206 | a.39.1 | EF-hand |
|
Region A: Residues: [171-294] |
1 11 21 31 41 51
| | | | | |
1 SSSGSNSAPL SANNIISCSN LIQGKDVDQL EEEAWRFGHL KDEITTLGIL GEGAGGSVAK 60
61 CRLKNGKKVF ALKTINTMNT DPEYQKQIFR ELQFNKSFKS DYIVQYYGMF TDEQSSSIYI 120
121 AMEY
|
| Detection Method: | |
| Confidence: | 395.0 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-506] |
1 11 21 31 41 51
| | | | | |
1 MGGKSLEATY KNLLKRGGRI SERVIGKIAE SVLRGLSYLH ERKVIHRDIK PQNILLNEKG 60
61 EIKLCDFGVS GEAVNSLAMT FTGTSFYMAP ERIQGQPYSV TCDVWSLGLT LLEVAGGRFP 120
121 FESDKITQNV APIELLTMIL TFSPQLKDEP ELDISWSKTF RSFIDYCLKK DARERPSPRQ 180
181 MLKHPWIVGQ MKKKVNMERF VKKCWEKEKD GI
|
| Detection Method: | |
| Confidence: | 395.0 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
