| Protein: | GIP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1276 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1276] | [1..1276] |
|
|
0.0 | [479..1081] | [20..622] |
|
|
0.0 | [499..1156] | [89..741] |
|
|
0.0 | [476..1079] | [30..611] |
|
|
0.0 | [541..1089] | [135..684] |
|
Region A: Residues: [1-498] |
1 11 21 31 41 51
| | | | | |
1 MITNTEFDVP VDWLYKGKSR RKTNTKPSRP STSPASSSST SSSKNGDNST SGNRSSNDKP 60
61 RARSSSVSNA ALCNTEKPDL KRNDGNTSAS DTDNIPLLTP INSGNRSDSA DIDNPATVDA 120
121 IDLIDNDDNG SSTQFVRKKR STSISNAVVS SKPRLASSAI NATASSSVGK GKHPPISSPS 180
181 NATLKRSNST SGEKTKRSIF GSLFSKRSTS SSASTAKKPL PVVNTSTTEN ESGGIKAVAT 240
241 PDPRVKEISS PMRGVAPTAS KPQTPILPSP ALAVKDLSTV SLKRVSFAVD KFESDPPQQL 300
301 PSRTPKKGNI LIPDDMISEV PSISVGISSS NQSAKSTNSN IKGPLYTKKS KEYILALENQ 360
361 KLALREAAKH QQEAHFAANR IAFEVANFKT ASDAGGKLTE KSSEGTITKQ REEVSPPNVE 420
421 ADRELENNKL AENLSKAGID KPIHMHEHYF KEPDQDKYQD GHSIENNEVT LDVIYTRCCH 480
481 LREILPIPST LRQVKDKT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [499-592] |
1 11 21 31 41 51
| | | | | |
1 APLQILKFLN PKPTLIDILS FCDFITIAPI HTIVFDNVAL NQDMFRIIIS ALVNSTVLDK 60
61 LSLRNVRIDQ DGWKLLCKFL LLNKSLNKLD ISQT
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [593-644] |
1 11 21 31 41 51
| | | | | |
1 KIKSDLAESL YRHNMDWNLF TDVLSQRSHK PIEELLFNGI QFSKIPYSCF AR
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [645-701] |
1 11 21 31 41 51
| | | | | |
1 LLTSFATQKN FPESGIRLGL AGATTSNISQ DCLKFIFNWM SQYNVQGVDL AFNDLST
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [702-917] |
1 11 21 31 41 51
| | | | | |
1 MIKPMVGKLS ALSYDNLRYF ILNSTNISTS YDLALLLKYL SKLPNLIFLD LSNLSQCFPD 60
61 ILPYMYKYLP RFPNLKRIHL DSNNLTLKEL AVVCNILIKC KSLSHVSMTN QNVENFYLMN 120
121 GTDSPVQQTN TDGDLDSSST LDVKGQFAKN SFSSTLYAFA RDSPNLIGLD FDYDLISEEI 180
181 QSRIALCLMR NMKRTMDSTF QLDELDSQDD LLFDGS
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 2bnh__ |
| Description: | Ribonuclease inhibitor |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [918-1119] |
1 11 21 31 41 51
| | | | | |
1 LVTMTAESVL EKLNLLSDKS TKVKKDTTKR YLLKKYIEKF HILHHNVQHT IDTMFEKRKS 60
61 GELPLQEKEN LVRLLLLEQN LCNILELFSH NPNLNDVLGS SRDDSKESVD SSEDSKLPAL 120
121 KHVESGYHVP EEKIQPENDV ITARPHLMAT DSGKTIDVFT GKPLVFKHTS SSTSVGCKKQ 180
181 EEEEGELHKW GFFVQQQRSL YP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1120-1276] |
1 11 21 31 41 51
| | | | | |
1 ENESTRQTPF ASGDTPINTE TAGKSTSSPS VSTSNNETAT TSLFSPANPK ILPKIPSGAV 60
61 LRSAIMKAKG IDSIDDLIQN VNSNNIELEN IYGESIQNSA STFTPGVDSD VSAPNTDKGS 120
121 VETLPAVSTD DPNCEVKVTA TYDKLLNNLS MERSIRL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
