| Protein: | RPL5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 297 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..297] | [1..291] |
|
|
0.0 | [1..297] | [1..291] |
|
|
0.0 | [1..297] | [1..291] |
|
|
0.0 | [1..297] | [1..292] |
|
|
0.0 | [1..297] | [1..291] |
|
Region A: Residues: [1-297] |
1 11 21 31 41 51
| | | | | |
1 MAFQKDAKSS AYSSRFQTPF RRRREGKTDY YQRKRLVTQH KAKYNTPKYR LVVRFTNKDI 60
61 ICQIISSTIT GDVVLAAAYS HELPRYGITH GLTNWAAAYA TGLLIARRTL QKLGLDETYK 120
121 GVEEVEGEYE LTEAVEDGPR PFKVFLDIGL QRTTTGARVF GALKGASDGG LYVPHSENRF 180
181 PGWDFETEEI DPELLRSYIF GGHVSQYMEE LADDDEERFS ELFKGYLADD IDADSLEDIY 240
241 TSAHEAIRAD PAFKPTEKKF TKEQYAAESK KYRQTKLSKE ERAARVAAKI AALAGQQ
|
| Detection Method: |  |
| Confidence: | 241.228787 |
| Match: | 1ffkK_ |
| Description: | Ribosomal protein L18 (L18p) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [227-297] |
1 11 21 31 41 51
| | | | | |
1 LADDIDADSL EDIYTSAHEA IRADPAFKPT EKKFTKEQYA AESKKYRQTK LSKEERAARV 60
61 AAKIAALAGQ Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
