YRC Public Data Repository - Protein Structure Prediction

Protein:	SPO19
Organism:	Saccharomyces cerevisiae
Length:	223 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO19.

Description	E-value	Query Range	Subject Range
SPO19_YEAST - Sporulation-specific protein 19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPO19 PE... SPO19 - Meiosis-specific prospore protein; required to produce bending force necessary for proper assembly o...	0.0	[1..223]	[1..223]

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Predicted Domain #1

Region A:
Residues: [1-223]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQILIVAA QSILCSTVFG ERSNVGLSTE ELGGDSILYF NEDPIVIEID KKAIDKKTLE  60
   61 QLASTRDVVL TDLPDTLEFI DFNEYAKMKS KSDMLLEYIN EYEFDDFERS SEGGLEEEEE 120
  121 EDLIYDFNAQ AEDLGKLGSN IYEVVEEKNI VNTYDGNLIN ASTTESTTTI RPFVTSHSYV 180
  181 ASSTPYSNIS SLNEDYDNAS NFLTPTTVAL AVLLTILLFI QAY

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [155-223]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGNLINASTT ESTTTIRPFV TSHSYVASST PYSNISSLNE DYDNASNFLT PTTVALAVLL  60
   61 TILLFIQAY