| Protein: | HOS3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 697 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOS3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..697] | [1..697] |
|
|
0.0 | [50..606] | [10..475] |
|
|
0.0 | [50..566] | [10..445] |
|
|
0.0 | [50..566] | [10..445] |
|
|
0.0 | [50..566] | [10..445] |
|
|
0.0 | [50..566] | [10..445] |
|
|
0.0 | [22..652] | [31..616] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MSSKHSDPLE RFYKQFQAFV QNNPNVISAA RAAAQIPESA KAVVVLSPYS LQHVFPREWV 60
61 TKSYRKTIVE RPERLLASSM GISAAITMYP SLFTLKSSHQ RKGSLMAPHV LKVHGSSWPA 120
121 ELIELCQMAD AKLLKGEIEV PDTWNSGDIY LSSKTIKALQ GTIGAIETGV DSIFKGPSAE 180
181 HISNRAFVAI RPPGHHCHYG TPSGFCLLNN AHVAIEYAYD TYNV
|
| Detection Method: |  |
| Confidence: | 94.134302 |
| Match: | 1c3pA_ |
| Description: | HDAC homologue |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [225-465] |
1 11 21 31 41 51
| | | | | |
1 THVVVLDFDL HHGDGTQDIC WKRAGFKPEE EPEDSSYDDF GKKFAEFPKV GYFSMHDINS 60
61 FPTESGFATK ENIKNASTCI MNSHDLNIWN IHLSKWTTEE EFNVLYRTKY RTLFAKADEF 120
121 FRSAKLEMNQ QGRPFKGLVV ISAGFDASEF EQTSMQRHSV NVPTSFYTTF TKDALKLAQM 180
181 HCHGKVLSLM EGGYSDKAIC SGVFAHLIGL QNQDWVKEWG SEQVVKEIVR GCKPAWKPYK 240
241 T
|
| Detection Method: | |
| Confidence: | 94.134302 |
| Match: | 1c3pA_ |
| Description: | HDAC homologue |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [466-697] |
1 11 21 31 41 51
| | | | | |
1 KRAKDVIRIW AEEVIRLGRA MIPEFDDIIF KDAVNSAPSN SLLKATVEPA STSTIAQRII 60
61 RSHRSNASPE KELHENKPRS TEKQEQREIR SDTKVKQLSS NNRAAETQIP FLQQEFSSED 120
121 EDEEYVYDEE LNKTFNRTVE DITIDDISRH LETLEIEKKG DEDSDHELKE KNWKNSHQRR 180
181 LQGNGMYKIP SNTKPHRIRQ PQNANTPTYD DSDISMISHV SRKHTTRSGG RW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
