| Protein: | PEX25 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 394 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX25.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..394] | [1..394] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MSQFGTTDIV SGSETPPYSG ASYQDAQDDN THPHSSDAGA EKFSAGSGSE SHTESSRSDD 60
61 EDSQAKTKMV DNITILKYIL DSLS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.535 | a.77.1 | DEATH domain |
| View | Download | 0.287 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.245 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.240 | d.58.17 | Metal-binding domain |
| View | Download | 0.212 | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.202 | a.156.1 | S13-like H2TH domain |
|
Region A: Residues: [85-394] |
1 11 21 31 41 51
| | | | | |
1 GRDKLAKIIK YALDILKLFI EKSKRNLTVL DPSVLTYYTK ILKNLTVKVA LRHPITVIKV 60
61 LLLSLLRNFD KKIDFISQQL STFRYILRFG GTPFRVCSFL GKFNKTRKCN FQIDQIKKIW 120
121 FNEASLREFL DLYYGIFDEL DLLYKLKIWT NKSFYSFVSR QESLAWQYDI LLSLKDHWLN 180
181 LQSLQKRQLE LEVQLKVQNN ALLLSPILMH QAHKDDGSQS PIRKQLLNDL NVNNDAEVLI 240
241 HKQLKAIKDE KTLVYLDIAR LSFDCMANTS DILNLKTPKG TYAVLSLGSG LTGLVKLWIT 300
301 TKRSLCSSKD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.760 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.748 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.743 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.724 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.690 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
