YRC Public Data Repository - Protein Structure Prediction

Protein:	MGR2
Organism:	Saccharomyces cerevisiae
Length:	113 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGR2.

Description	E-value	Query Range	Subject Range
gi\|44981111 - gi\|44981111\|gb\|AAS50963.1\| ABR191Cp [Ashbya gossypii ATCC 10895] gi\|44981111, gi\|... - gi\|45185422\|ref\|NP_983139.1\| ABR191Cp [Ashbya gossypii ATCC 10895], gi\|44981111\|gb\|AAS50963.1\| ABR19...	146.0	[0..1]	[113..1]
gi\|49526357 - gi\|49526357\|emb\|CAG59981.1\| unnamed protein product [Candida glabrata] gi\|50289235, gi\|... - gi\|50289235\|ref\|XP_447048.1\| unnamed protein product [Candida glabrata], gi\|49526357\|emb\|CAG59981.1\|...	145.0	[0..1]	[113..1]
gi\|50310063, gi\|... - gi\|50310063\|ref\|XP_455045.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644180\|emb\|CAH0013... gi\|49644180 - gi\|49644180\|emb\|CAH00132.1\| KLLA0E24289p [Kluyveromyces lactis]	140.0	[0..1]	[113..1]
gi\|195590411, gi... - gi\|195590411\|ref\|XP_002084939.1\| GD14530 [Drosophila simulans], gi\|194196948\|gb\|EDX10524.1\| GD14530 ... gi\|220950798, gi... - gi\|220959574\|gb\|ACL92330.1\| CG6878-PA [synthetic construct], gi\|220950798\|gb\|ACL87942.1\| CG6878-PA [... gi\|195327733, gi... - gi\|195327733\|ref\|XP_002030572.1\| GM25515 [Drosophila sechellia], gi\|194119515\|gb\|EDW41558.1\| GM25515... gi\|195495137, gi... - gi\|195495137\|ref\|XP_002095139.1\| GE22228 [Drosophila yakuba], gi\|194181240\|gb\|EDW94851.1\| GE22228 [D... gi\|194872687, gi... - gi\|194872687\|ref\|XP_001973063.1\| GG15884 [Drosophila erecta], gi\|190654846\|gb\|EDV52089.1\| GG15884 [D... CG6878-PA - This gene is referred to in FlyBase by the symbol Dmel\CG6878 (CG6878, FBgn0036488). It is a protein...	111.0	[0..1]	[78..1]
gi\|46440715, gi\|... - gi\|68474051\|ref\|XP_718922.1\| hypothetical protein CaO19.13483 [Candida albicans SC5314], gi\|68473842... orf19.13483, orf... - orf19.6062 CGDID:CAL0005161 Assembly 19, Contig19-10237 (126026, 125706) CDS, reverse complemented, ... gi\|238879452 - gi\|238879452\|gb\|EEQ43090.1\| hypothetical protein CAWG_01327 [Candida albicans WO-1]	111.0	[0..1]	[81..1]
gi\|50557122, gi\|... - gi\|50557122\|ref\|XP_505969.1\| YALI0F27929p [Yarrowia lipolytica], gi\|49651839\|emb\|CAG78781.1\| unnamed... gi\|49651839 - gi\|49651839\|emb\|CAG78781.1\| YALI0F27929p [Yarrowia lipolytica]	109.0	[0..1]	[80..1]
gi\|54641918, gi\|... - gi\|54641918\|gb\|EAL30667.1\| GA19926 [Drosophila pseudoobscura pseudoobscura], gi\|125978265\|ref\|XP_001... gi\|125978265\|ref... - GA19926-PA [Drosophila pseudoobscura], GA19926 [Drosophila pseudoobscura pseudoobscura] gi\|194104177, gi... - gi\|195162748\|ref\|XP_002022216.1\| GL24788 [Drosophila persimilis], gi\|194104177\|gb\|EDW26220.1\| GL2478...	108.0	[0..1]	[78..1]
gi\|58393907, gi\|... - gi\|58393907\|ref\|XP_320383.2\| AGAP012145-PA [Anopheles gambiae str. PEST], gi\|55234515\|gb\|EAA00196.2\|... AGAP012145-PA - Reactive oxygen species modulator 1\|protein_coding\|3L:38047178:38047511:1\|gene:AGAP012145	107.0	[0..1]	[78..1]
gi\|110760982 - gi\|110760982\|ref\|XP_001120967.1\| PREDICTED: similar to CG6878-PA [Apis mellifera]	107.0	[0..1]	[78..1]
gi\|108875624, gi... - gi\|157118755\|ref\|XP_001653245.1\| hypothetical protein AaeL_AAEL008394 [Aedes aegypti], gi\|108875624\|...	106.0	[0..1]	[78..1]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLPQNYAQ QQPSNWDKFK MGLMMGTTVG VCTGILFGGF AIATQGPGPD GVVRTLGKYI  60
   61 AGSAGTFGLF MSIGSIIRSD SESSPMSHPN LNLQQQARLE MWKLRAKYGI RKD

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.970	a.1.1	Globin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits