YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YPL077C
Organism: Saccharomyces cerevisiae
Length: 240 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL077C.

Description E-value Query
Range
Subject
Range
YP077_YEAST - Uncharacterized protein YPL077C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL077C ...
YPL077C - Putative protein of unknown function; regulates PIS1 expression; mutant displays spore wall assembly...
gi|151942719 - gi|151942719|gb|EDN61065.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|207340537 - gi|207340537|gb|EDZ68860.1| YPL077Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190407876 - gi|190407876|gb|EDV11141.1| hypothetical protein SCRG_02417 [Saccharomyces cerevisiae RM11-1a]
0.0 [1..240] [1..240]

Back

Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDLQKKSSV RRQITNEDDE RYGEDSIHDL PRTIPNVNPY IRNSGFRPSY SSQIPSTRSL  60
   61 FNNYYNRSSA NTVGNDTIDT DSVSYNGVAK FRRNSVDIPL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.482 a.28.1 ACP-like
View Download 0.482 a.28.1 ACP-like
View Download 0.277 a.4.5 "Winged helix" DNA-binding domain
View Download 0.277 a.4.5 "Winged helix" DNA-binding domain
View Download 0.244 a.29.4 RecG, N-terminal domain
View Download 0.244 a.29.4 RecG, N-terminal domain
View Download 0.244 a.4.5 "Winged helix" DNA-binding domain
View Download 0.244 a.4.5 "Winged helix" DNA-binding domain
View Download 0.236 c.23.5 Flavoproteins
View Download 0.236 c.23.5 Flavoproteins
View Download 0.207 a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [101-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTHNRLEVRP IIDRQDYLWR EIDALDDVKR QAQATELYDQ FPPGFENKLM QLRQAHSKLL  60
   61 QVLRDRNAKI EEEQRREVAV ATAAAMMTRT PSPTGKSVGD EATSNNMHSS SAIRNPNGPT 120
  121 VDPEEGKYIQ ELVNTIRELQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.747 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.747 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.596 N/A N/A a.7.7 BAG domain
View Download 0.596 N/A N/A a.7.7 BAG domain
View Download 0.579 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.502 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.502 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.483 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.477 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.476 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.476 N/A N/A a.63.1 Apolipophorin-III
View Download 0.428 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.415 N/A N/A a.24.3 Cytochromes
View Download 0.374 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.373 N/A N/A a.24.4 Hemerythrin
View Download 0.312 N/A N/A a.24.2 Aspartate receptor, ligand-binding domain
View Download 0.308 N/A N/A a.23.3 Methane monooxygenase hydrolase, gamma subunit
View Download 0.307 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.291 N/A N/A a.118.1 ARM repeat
View Download 0.283 N/A N/A a.47.2 t-snare proteins
View Download 0.281 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.281 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain
View Download 0.274 N/A N/A a.118.8 TPR-like
View Download 0.268 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.264 N/A N/A a.1.1 Globin-like
View Download 0.241 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.237 N/A N/A f.1.3 delta-Endotoxin (insectocide), N-terminal domain
View Download 0.236 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.226 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.225 N/A N/A a.70.1 N-terminal domain of the delta subunit of the F1F0-ATP synthase
View Download 0.222 N/A N/A a.7.4 Smac/diablo
View Download 0.203 N/A N/A a.73.1 Retrovirus capsid protein, N-terminal core domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle