YRC Public Data Repository - Protein Structure Prediction

Protein:	YPL073C
Organism:	Saccharomyces cerevisiae
Length:	161 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPL073C.

Description	E-value	Query Range	Subject Range
YP073_YEAST - Uncharacterized protein YPL073C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL073C ... YPL073C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a... gi\|207340530 - gi\|207340530\|gb\|EDZ68854.1\| hypothetical protein AWRI1631_161950 [Saccharomyces cerevisiae AWRI1631]	7.0E-84	[1..161]	[1..161]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSNVFITIF GEIDVLRSFT DIKSKIKLVR LSCKGASELD EFSSRLCLVV LSTVGLSPFA  60
   61 LFDSLVSNSR RTVLIRFKYS TNRGIPARPC KDDVMKQSFP RLIKPTVVYF PILCLESPKT 120
  121 SALRLGAMAY REAAIIKPHE TFLISEVGDS VTFFIQDILC L

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits