Protein: | CWC27 |
Organism: | Saccharomyces cerevisiae |
Length: | 301 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWC27.
Description | E-value | Query Range |
Subject Range |
|
1.0E-76 | [1..301] | [1..301] |
|
4.0E-71 | [5..301] | [7..322] |
|
3.0E-68 | [5..301] | [7..322] |
|
5.0E-64 | [1..301] | [1..367] |
|
1.0E-63 | [3..298] | [5..374] |
|
7.0E-63 | [6..297] | [8..345] |
|
7.0E-63 | [8..155] | [1..165] |
Region A: Residues: [1-197] |
1 11 21 31 41 51 | | | | | | 1 MSSNIEPQTT AKCILYTTKG NIAIELWAKE CPETCKRFLS MLSDGTFTNG EFKELKPTQW 60 61 LMFNANSTGE YRTVAEEKNP RIRFNRDGLL GWDRRRNTWF ITVLADSKHV LNDCNVFGKI 120 121 VGKSIYIFRE ILGGEIEASS RDNDVKRFMY PAVLKDVEIT IPFFEDIFGS KRRLEDNEKK 180 181 EQEPAKKLVK SAKVKMV |
Detection Method: | |
Confidence: | 63.69897 |
Match: | 1ak4A_ |
Description: | Cyclophilin (eukaryotic) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
catalytic activity | 0.748655649755714 | bayes_pls_golite062009 |
binding | 0.508724818609046 | bayes_pls_golite062009 |
Region A: Residues: [198-301] |
1 11 21 31 41 51 | | | | | | 1 YEDEQEDDDG DVQKLKPRKR MILPAWIKDD SRSEGIKLDA SLDQPQEALI REKTELHDNV 60 61 DEATTKETES QENIKEEPMD KRERETLAML SKFQERIKNK NILK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.253 | c.23.1 | CheY-like |
View | Download | 0.306 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
View | Download | 0.356 | a.24.3 | Cytochromes |
View | Download | 0.247 | a.4.3 | ARID-like |
View | Download | 0.257 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
View | Download | 0.244 | a.142.1 | PTS-regulatory domain, PRD |
View | Download | 0.241 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
View | Download | 0.236 | a.7.1 | Spectrin repeat |
View | Download | 0.235 | b.55.1 | PH domain-like |
View | Download | 0.231 | a.29.2 | Bromodomain |
View | Download | 0.230 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.221 | a.47.2 | t-snare proteins |
View | Download | 0.218 | a.24.3 | Cytochromes |
View | Download | 0.218 | a.1.1 | Globin-like |
View | Download | 0.218 | a.47.2 | t-snare proteins |
View | Download | 0.206 | d.94.1 | HPr-like |