| Protein: | LPE10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 413 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPE10.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-68 | [1..413] | [1..413] |
|
|
5.0E-61 | [28..393] | [25..370] |
|
|
6.0E-61 | [47..393] | [34..350] |
|
|
6.0E-60 | [29..395] | [24..370] |
|
|
5.0E-59 | [8..394] | [1..345] |
|
|
2.0E-58 | [28..395] | [26..373] |
|
|
6.0E-56 | [59..393] | [50..355] |
|
|
1.0E-55 | [84..394] | [66..356] |
|
|
6.0E-55 | [59..393] | [49..353] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MRAFPRVLPF RHQRSYNNIL LRTVRLFGSS LSSFDFSRQM PKVDPDNTAA MLLQKNLIQR 60
61 NNMLYGYGSG TIRCTLLDST GRAKSPLVEI KREDLVSKHG LLPRDLRKIE KSRKNDL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.612 | 0.015 | mitochondrial inner membrane | a.28.1 | ACP-like |
| View | Download | 0.495 | 0.013 | mitochondrial inner membrane | a.74.1 | Cyclin-like |
| View | Download | 0.482 | 0.001 | mitochondrial inner membrane | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.471 | 0.001 | mitochondrial inner membrane | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.443 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.434 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.434 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.431 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.427 | N/A | N/A | d.206.1 | YggU-like |
| View | Download | 0.392 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.391 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.386 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.372 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.369 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.369 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.352 | N/A | N/A | g.36.1 | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain |
| View | Download | 0.347 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.340 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.340 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.339 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.324 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.321 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.318 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.316 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.301 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.292 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.280 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.274 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.272 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.265 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.264 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.263 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.262 | N/A | N/A | a.18.1 | T4 endonuclease V |
| View | Download | 0.260 | N/A | N/A | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.257 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.256 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.255 | N/A | N/A | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.250 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.244 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.242 | N/A | N/A | d.58.30 | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
| View | Download | 0.242 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.240 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.221 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.219 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.219 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.216 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.212 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.209 | N/A | N/A | d.130.1 | S-adenosylmethionine synthetase |
| View | Download | 0.208 | N/A | N/A | d.42.1 | POZ domain |
|
Region A: Residues: [118-413] |
1 11 21 31 41 51
| | | | | |
1 VPSLLVRENS ILISLLTVKA LIKPDMVIIF DSAGSGITLN SEAHKDFIND MKLRLKNQET 60
61 SELNSDPLPY EFRALETIFI SALSNLTSEM KVLLTICKGV LQDLEFSITR DKLRFLLGQN 120
121 KKLSSFNKKA VLVKDMLDDL LEQDDMLCDM YLTDKKAGKI RVQDDHTEIE MLLETYHNYV 180
181 DEIVQKSESA ISDVKTTEEI INIILDSNRN ELMLLGIRYA IGMLSLGGAL FLGSIYGMNL 240
241 ESFIEESNYA YLTVTILGLI STVWLYAKGI RHLHKLQRMT LLSKIKTDSV HELLKK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
