| Protein: | LEE1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 301 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LEE1.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-51 | [1..301] | [1..301] |
|
|
6.0E-29 | [40..281] | [119..368] |
|
|
2.0E-28 | [40..281] | [45..283] |
|
|
3.0E-26 | [87..247] | [55..218] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MDAFENMSVS NHPGGNARRN SQSANEMLAS QIQDFQNIPR SFNDSNANVN LSKNCTVGNQ 60
61 LPFSSRQQKI IMEHLLITKN NSQQQKDYSH VPCKFFKMGN CQAGSSCPFS HSPDIISS
|
| Detection Method: |  |
| Confidence: | 11.39794 |
| Match: | 1m9oA_ |
| Description: | Tristetraproline (ttp, tis11, nup475) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [119-301] |
1 11 21 31 41 51
| | | | | |
1 ANNLPCKYFA KGNCKFGNKC VNAHVLPNGF KMNSKEPIDI TPPSQNNYLS HARSASFSTY 60
61 TSPPLSAQTE FSHSASNANY FSSQYLMYSP QKSPEALYTE FFSPPSSSSS YINYSYNNSN 120
121 INAYSPVSSS SSNIWQEQGQ TTLSNPSVNQ NLRYRTGPAI QEESDNEIED LLIHNFNSRY 180
181 CHE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [184-301] |
1 11 21 31 41 51
| | | | | |
1 SAQTEFSHSA SNANYFSSQY LMYSPQKSPE ALYTEFFSPP SSSSSYINYS YNNSNINAYS 60
61 PVSSSSSNIW QEQGQTTLSN PSVNQNLRYR TGPAIQEESD NEIEDLLIHN FNSRYCHE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
