| Protein: | MET12 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 657 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET12.
| Description | E-value | Query Range |
Subject Range |
|
|
821.0 | [0..2] | [655..67] |
|
|
819.0 | [0..2] | [655..67] |
|
|
817.0 | [0..2] | [655..67] |
|
Region A: Residues: [1-324] |
1 11 21 31 41 51
| | | | | |
1 MSIRDLYHAR ASPFISLEFF PPKTELGTRN LMERMHRMTA LDPLFITVTW GAGGTTAEKT 60
61 LTLASLAQQT LNIPVCMHLT CTNTEKAIID DALDRCYNAG IRNILALRGD PPIGEDWLDS 120
121 QSNESPFKYA VDLVRYIKQS YGDKFCVGVA AYPEGHCEGE AEGHEQDPLK DLVYLKEKVE 180
181 AGADFVITQL FYDVEKFLTF EMLFRERISQ DLPLFPGLMP INSYLLFHRA AKLSHASIPP 240
241 AILSRFPPEI QSDDNAVKSI GVDILIELIQ EIYQRTSGRI KGFHFYTLNL EKAIAQIVSQ 300
301 SPVLSHIVNE SSEEEGEDET SGEI
|
| Detection Method: |  |
| Confidence: | 416.502279 |
| Match: | 1b5tA |
| Description: | Methylenetetrahydrofolate reductase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-393] |
1 11 21 31 41 51
| | | | | |
1 GSIENVPIED ADGDIVLDDS NEETVANRKR RRHSSLDSAK LIFNRAIVTE KGLRYNNENG 60
61 SMPSKKALI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.516 | a.101.1 | Uteroglobin-like |
| View | Download | 0.464 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.464 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.443 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.430 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.430 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.417 | a.276.1 | Description not found. |
| View | Download | 0.393 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.319 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [394-657] |
1 11 21 31 41 51
| | | | | |
1 SISKGHGTLG RDATWDEFPN GRFGDSRSPA YGEIDGYGPS IKVSKSKALE LWGIPKTIGD 60
61 LKDIFIKYLE GSTDAIPWSD LGLSAETALI QEELIQLNYR GYLTLASQPA TNATLSSDKI 120
121 FGWGPAKGRL YQKAFVEMFI HRQQWETTLK PKLDHYGRRK FSYYAGDSSG SFETNLDPHS 180
181 SSVVTWGVFP NSPVKQTTII EEESFKAWRD EAFSIWSEWA KLFPRNTPAN ILLRLVHKDY 240
241 CLVSIVHHDF KETDELWEML LDQA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
