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View Structure Prediction Details

Protein: YOR389W
Organism: Saccharomyces cerevisiae
Length: 624 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR389W.

Description E-value Query
Range
Subject
Range
YOR389W - Putative protein of unknown function; expression regulated by copper levels
YO389_YEAST - Uncharacterized protein YOR389W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR389W ...
0.0 [1..624] [1..624]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFHRQGTAA TVGVLLIVLL GFCWKLSESY GIVSTALPHK QPATKITDTP SIRWDNYHEF  60
   61 VRDIDFDNST AIFNSIRAAL RQSPSDIHPV GVSYFPAVIP KGTLMYHAGS KVPTTFEWLA 120
  121 MDHEFSYSFG LRSPSYGRKS LERRHGRFGN GTHGDHPKGP PPPPPPDEKD RGSQKMLTYR 180
  181 AARDLNKFLY LDGASAAKTD SGEMDTQLML SNVIKEKLNL TDDGENERMA ERLYAARICK 240
  241 WGKPFGLDGI IRVEVGFEVV LCDFSADNVE LVSMLEMVQP NQYLGLPAPT VISKEEGWPL 300
  301 DENGNLVEDQ LTDDQKAILE REDGWEKTFS NFNAVKSFNQ LRAGTAHDNG EHRIHIDYRY 360
  361 LVSGINRTYI APDPNNRRLL DEGMTWEKQL DMVDDLEKAL EVGFDATQSM DWQLAFDELV 420
  421 LKFAPLLKSV SNILNSNGDI NESIAINATA LTLNFCLRFE PASNNSDEFG SGKDFAVYQY 480
  481 VSPYQALKT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [490-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DADFLIWSSA VSVVGEIVDA IYKVNDLLIP EVYSFMTDNT TSSDLIKNVE TARSTIDGLI  60
   61 ESLGWIELNY RCERQCNWDE VCYTPSWGPS PMGMTEPGSH NEGFGTHFDE SRQRLVINSK 120
  121 LQCININDLM VNRNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.870 N/A N/A a.47.2 t-snare proteins
View Download 0.792 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.777 N/A N/A a.7.7 BAG domain
View Download 0.680 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.677 N/A N/A a.25.1 Ferritin-like
View Download 0.675 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.664 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.640 N/A N/A a.19.1 Fertilization protein
View Download 0.630 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.618 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.615 N/A N/A a.7.5 Tubulin chaperone cofactor A
View Download 0.609 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.606 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.590 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.586 N/A N/A a.24.1 Apolipoprotein
View Download 0.567 N/A N/A a.24.3 Cytochromes
View Download 0.563 N/A N/A a.25.1 Ferritin-like
View Download 0.560 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.545 N/A N/A a.24.3 Cytochromes
View Download 0.543 N/A N/A a.24.3 Cytochromes
View Download 0.542 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.523 N/A N/A a.47.2 t-snare proteins
View Download 0.516 N/A N/A a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.505 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.482 N/A N/A a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.478 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.474 N/A N/A a.71.2 Helical domain of Sec23/24
View Download 0.472 N/A N/A a.7.1 Spectrin repeat
View Download 0.463 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.461 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.458 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.445 N/A N/A d.58.26 GHMP Kinase, C-terminal domain
View Download 0.443 N/A N/A a.25.1 Ferritin-like
View Download 0.442 N/A N/A a.7.1 Spectrin repeat
View Download 0.422 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.420 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.407 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.400 N/A N/A a.63.1 Apolipophorin-III
View Download 0.394 N/A N/A a.2.8 Eukaryotic DNA topoisomerase I, dispensable insert domain
View Download 0.394 N/A N/A f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.389 N/A N/A a.26.1 4-helical cytokines
View Download 0.388 N/A N/A d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.388 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.386 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.381 N/A N/A a.118.1 ARM repeat
View Download 0.380 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.372 N/A N/A a.118.8 TPR-like
View Download 0.371 N/A N/A a.19.1 Fertilization protein
View Download 0.360 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.355 N/A N/A a.72.1 Functional domain of the splicing factor Prp18
View Download 0.355 N/A N/A f.15.1 Small-conductance potassium channel
View Download 0.354 N/A N/A a.62.1 Hepatitis B viral capsid (hbcag)
View Download 0.350 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.349 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.348 N/A N/A a.26.1 4-helical cytokines
View Download 0.342 N/A N/A a.1.1 Globin-like
View Download 0.340 N/A N/A a.26.1 4-helical cytokines
View Download 0.340 N/A N/A d.24.1 Pili subunits
View Download 0.337 N/A N/A a.48.2 Transferrin receptor ectodomain, C-terminal domain
View Download 0.334 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.333 N/A N/A a.24.14 FAT domain of focal adhesion kinase
View Download 0.324 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.302 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.296 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.293 N/A N/A a.126.1 Serum albumin-like
View Download 0.290 N/A N/A a.26.1 4-helical cytokines
View Download 0.288 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.288 N/A N/A a.24.12 Outer surface protein C (OspC)
View Download 0.287 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.280 N/A N/A a.74.1 Cyclin-like
View Download 0.279 N/A N/A d.150.1 4'-phosphopantetheinyl transferase
View Download 0.277 N/A N/A a.2.1 GreA transcript cleavage protein, N-terminal domain
View Download 0.272 N/A N/A d.58.30 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
View Download 0.270 N/A N/A a.25.1 Ferritin-like
View Download 0.269 N/A N/A a.39.1 EF-hand
View Download 0.268 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.258 N/A N/A a.7.8 GAT domain
View Download 0.258 N/A N/A a.23.3 Methane monooxygenase hydrolase, gamma subunit
View Download 0.256 N/A N/A a.25.2 Thermoplasma ferritin-like 4-helical bundle
View Download 0.252 N/A N/A f.34.1 Mechanosensitive channel protein MscS (YggB), transmembrane region
View Download 0.252 N/A N/A f.25.1 Cytochrome c oxidase subunit III-like
View Download 0.249 N/A N/A d.24.1 Pili subunits
View Download 0.248 N/A N/A f.1.3 delta-Endotoxin (insectocide), N-terminal domain
View Download 0.240 N/A N/A a.118.16 Testis/brain RNA-binding protein (TB-RBP)
View Download 0.239 N/A N/A a.100.1 6-phosphogluconate dehydrogenase C-terminal domain-like
View Download 0.236 N/A N/A a.66.1 Transducin (alpha subunit), insertion domain
View Download 0.236 N/A N/A d.162.1 LDH C-terminal domain-like
View Download 0.235 N/A N/A a.2.6 Effector domain of the protein kinase pkn/prk1
View Download 0.230 N/A N/A a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.228 N/A N/A a.26.1 4-helical cytokines
View Download 0.216 N/A N/A a.126.1 Serum albumin-like
View Download 0.212 N/A N/A f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.211 N/A N/A c.78.2 Aspartate/glutamate racemase
View Download 0.211 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.209 N/A N/A d.6.1 Prion-like
View Download 0.207 N/A N/A g.53.1 TAZ domain
View Download 0.207 N/A N/A d.162.1 LDH C-terminal domain-like
View Download 0.203 N/A N/A a.2.7 tRNA-binding arm
View Download 0.202 N/A N/A f.17.1 F1F0 ATP synthase subunit C
View Download 0.201 N/A N/A a.118.7 14-3-3 protein

Predicted Domain #3
Region A:
Residues: [518-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPEVYSFMTD NTTSSDLIKN VETARSTIDG LIESLGWIEL NYRCERQCNW DEVCYTPSWG  60
   61 PSPMGMTEPG SHNEGFGTHF DESRQRLVIN SKLQCININD LMVNRNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.870 N/A N/A a.47.2 t-snare proteins
View Download 0.792 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.777 N/A N/A a.7.7 BAG domain
View Download 0.774 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.768 N/A N/A a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle