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View Structure Prediction Details

Protein: YOR389W
Organism: Saccharomyces cerevisiae
Length: 624 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR389W.

Description E-value Query
Range
Subject
Range
YOR389W - Putative protein of unknown function; expression regulated by copper levels
YO389_YEAST - Uncharacterized protein YOR389W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR389W ...
0.0 [1..624] [1..624]

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Predicted Domain #1
Region A:
Residues: [1-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFHRQGTAA TVGVLLIVLL GFCWKLSESY GIVSTALPHK QPATKITDTP SIRWDNYHEF  60
   61 VRDIDFDNST AIFNSIRAAL RQSPSDIHPV GVSYFPAVIP KGTLMYHAGS KVPTTFEWLA 120
  121 MDHEFSYSFG LRSPSYGRKS LERRHGRFGN GTHGDHPKGP PPPPPPDEKD RGSQKMLTYR 180
  181 AARDLNKFLY LDGASAAKTD SGEMDTQLML SNVIKEKLNL TDDGENERMA ERLYAARICK 240
  241 WGKPFGLDGI IRVEVGFEVV LCDFSADNVE LVSMLEMVQP NQYLGLPAPT VISKEEGWPL 300
  301 DENGNLVEDQ LTDDQKAILE REDGWEKTFS NFNAVKSFNQ LRAGTAHDNG EHRIHIDYRY 360
  361 LVSGINRTYI APDPNNRRLL DEGMTWEKQL DMVDDLEKAL EVGFDATQSM DWQLAFDELV 420
  421 LKFAPLLKSV SNILNSNGDI NESIAINATA LTLNFCLRFE PASNNSDEFG SGKDFAVYQY 480
  481 VSPYQALKT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [490-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DADFLIWSSA VSVVGEIVDA IYKVNDLLIP EVYSFMTDNT TSSDLIKNVE TARSTIDGLI  60
   61 ESLGWIELNY RCERQCNWDE VCYTPSWGPS PMGMTEPGSH NEGFGTHFDE SRQRLVINSK 120
  121 LQCININDLM VNRNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.870 N/A N/A a.47.2 t-snare proteins

Predicted Domain #3
Region A:
Residues: [518-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPEVYSFMTD NTTSSDLIKN VETARSTIDG LIESLGWIEL NYRCERQCNW DEVCYTPSWG  60
   61 PSPMGMTEPG SHNEGFGTHF DESRQRLVIN SKLQCININD LMVNRNH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.870 N/A N/A a.47.2 t-snare proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle