| Protein: | GDS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 522 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDS1.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..68] | [483..1466] |
|
|
197.0 | [0..216] | [473..26] |
|
|
195.0 | [0..217] | [473..27] |
|
|
190.0 | [0..1] | [308..1] |
|
|
189.0 | [0..185] | [498..1] |
|
|
187.0 | [0..221] | [516..92] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MALANSRPLQ IPTLENEILH NSNSPVFQLN SMGFTTRADT ISNPGTDLIG NQPGMALDDN 60
61 NLAGSSFSSS QEIKATKPKK DFGAPKKDNP LLEISKLIPV TGERPKPENR DSPLDDDVLH 120
121 AVFLILWEM
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | d.20.1 | UBC-like |
| View | Download | 0.260 | d.129.3 | Bet v1-like |
|
Region A: Residues: [130-522] |
1 11 21 31 41 51
| | | | | |
1 DPNQQGMTVK QLCDLLLQKH PDMSNLSTKL SNLISAKLNA YVKKIEKGEK TLTYALSREW 60
61 SNSSPRRMLY IYRGILSPDY KEHAQAVTMQ LKQQLETSGD TSDFNSNGKK KRESSSNQLV 120
121 NNDSYSSSMT DMKNMSSNSS FSKNLNVGNL AFSLSPEFNI PYSTSPVSLN LSPSMSNNQQ 180
181 QLLTPNSASK SKNNNKKRNY MDEDTNESMT EPKKTKTTKP GKQTKSQSLS VLSTPKKGSS 240
241 ASLSTFASSK NISPDSSLSH NASSNTYVTA AAAAPRLSKL LPKNGFKKNS RSSSELAAIH 300
301 KVISTQTPIE SSSESSQYNS SSSSPVNSAA ASSAESLSDI NSSQDNGRES NPSSQESRNE 360
361 VTNWMKIVRN GFLTHDIESP ESITLDDLEN IFN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
