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View Structure Prediction Details

Protein: SFG1
Organism: Saccharomyces cerevisiae
Length: 346 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SFG1.

Description E-value Query
Range
Subject
Range
SFG1 - Nuclear protein, putative transcription factor required for growth of superficial pseudohyphae (whic...
SFG1_YEAST - Superficial pseudohyphal growth protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..346] [1..346]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEMHSSDTL LLRTPKSKKK IGLVIPSTPS KKCKYSSGFI AEDTTPSKRF RLYQAKFKTS  60
   61 SKNVKAQTLS VSIKKNQGEI TNPFMTEGYN DYRNIVSPGL SFDNDCFSEH ELVSPLSDIS 120
  121 SINSTSPDVE KIDSLDPFGV DSFVWNCKPL VNKEALELHR MIHSSFPMSP LESNSDVPLL 180
  181 LPKLKKRLSP VNRSTFKPTR YEPSHRLLKP KKSILTVPAK SLNLIVSSSR GSLNDATIFA 240
  241 TEINSTLSNE ENKLPAISSI WEKLTIPVNS SIKEKYKKLK DQIYGQASNF GEDEDNEEDN 300
  301 EDDLPDAAVI RGYEFQSGRR DELTQCNELQ STKDYKKVQW AKVLEQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle