YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YOR292C
Organism: Saccharomyces cerevisiae
Length: 309 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR292C.

Description E-value Query
Range
Subject
Range
YO292_YEAST - Vacuolar membrane protein YOR292C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR292...
gi|151945374 - gi|151945374|gb|EDN63617.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|207340919 - gi|207340919|gb|EDZ69120.1| YOR292Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190407592 - gi|190407592|gb|EDV10859.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YOR292C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..309] [1..309]
gi|16902312 - gi|16902312|gb|AAL30173.1|AF320622_1 FKSG24 [Homo sapiens]
2.0E-41 [176..308] [55..188]
gi|25411581, gi|... - gi|3650028|gb|AAC61283.1| 22 kDa peroxisomal membrane protein [Arabidopsis thaliana], pir||C84522 22...
4.0E-39 [170..308] [107..244]
M17L2_MOUSE - Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1
7.0E-39 [176..307] [55..187]
SYM1_SCHPO - Protein sym1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sym1 PE=3 SV=1
SPAC3G6.05 - Mvp17 /PMP22 family
7.0E-37 [181..308] [67..193]

Back

Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLQLFGRDQ IVVHYDNGNM SNDDQNHQSV LGSWTRRAAA ALRTLMNKRI QRITLTHWLL  60
   61 LVIWVTSLWK FTSHYRQLYA NSAVFATLCT NILLFGISDI LAQSIACFYS YHVDPIPQIL 120
  121 NDTFHHVQNN RDVENGGGYE SDELSIFNDF TSEHSSYTDN DDY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PELDRPLATF KTDTFDFFRW GCFMFWGFFI SFFQAPWYKF LNFFYTEDPT VVQVFERVLS  60
   61 DQLLYSPISL YCFFMFSNYV MEGGDKDTLG KKIQRLYIST LGCNYLVWPM VQFINFLIMP 120
  121 RDFQAPFSSS VGVVWNCFLS MRNASK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.592 0.064 fungal-type vacuole a.24.3 Cytochromes
View Download 0.684 0.024 fungal-type vacuole a.24.14 FAT domain of focal adhesion kinase
View Download 0.610 0.022 fungal-type vacuole a.24.11 Bacterial GAP domain
View Download 0.592 0.000 integral to membrane a.24.3 Cytochromes
View Download 0.684 0.000 integral to membrane a.24.14 FAT domain of focal adhesion kinase
View Download 0.610 0.000 integral to membrane a.24.11 Bacterial GAP domain
View Download 0.782 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.782 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.739 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.577 N/A N/A i.11.1 Computational models partly based on NMR data
View Download 0.574 N/A N/A a.24.3 Cytochromes
View Download 0.563 N/A N/A a.7.7 BAG domain
View Download 0.558 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.538 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.520 N/A N/A a.7.7 BAG domain
View Download 0.501 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.485 N/A N/A a.47.2 t-snare proteins
View Download 0.468 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.467 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.465 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.454 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.435 N/A N/A a.24.1 Apolipoprotein
View Download 0.426 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.422 N/A N/A a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.419 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.414 N/A N/A c.23.1 CheY-like
View Download 0.411 N/A N/A a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.410 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.397 N/A N/A a.24.3 Cytochromes
View Download 0.390 N/A N/A a.77.1 DEATH domain
View Download 0.386 N/A N/A f.25.1 Cytochrome c oxidase subunit III-like
View Download 0.373 N/A N/A b.40.4 Nucleic acid-binding proteins
View Download 0.373 N/A N/A a.63.1 Apolipophorin-III
View Download 0.371 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.371 N/A N/A a.1.1 Globin-like
View Download 0.350 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.332 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.329 N/A N/A a.19.1 Fertilization protein
View Download 0.329 N/A N/A b.40.4 Nucleic acid-binding proteins
View Download 0.324 N/A N/A a.26.1 4-helical cytokines
View Download 0.324 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.322 N/A N/A c.18.1 DNA glycosylase
View Download 0.317 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.317 N/A N/A a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.316 N/A N/A a.25.1 Ferritin-like
View Download 0.303 N/A N/A c.55.1 Actin-like ATPase domain
View Download 0.302 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.300 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.299 N/A N/A a.7.1 Spectrin repeat
View Download 0.299 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.298 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.291 N/A N/A f.34.1 Mechanosensitive channel protein MscS (YggB), transmembrane region
View Download 0.285 N/A N/A a.118.11 Cytochrome c oxidase subunit E
View Download 0.280 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.278 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.276 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.276 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.274 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.269 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.267 N/A N/A d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
View Download 0.265 N/A N/A a.62.1 Hepatitis B viral capsid (hbcag)
View Download 0.264 N/A N/A a.19.1 Fertilization protein
View Download 0.263 N/A N/A c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.258 N/A N/A a.60.10 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
View Download 0.255 N/A N/A a.118.8 TPR-like
View Download 0.254 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.253 N/A N/A a.62.1 Hepatitis B viral capsid (hbcag)
View Download 0.252 N/A N/A a.24.3 Cytochromes
View Download 0.250 N/A N/A a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.249 N/A N/A a.25.1 Ferritin-like
View Download 0.248 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.248 N/A N/A a.1.1 Globin-like
View Download 0.247 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.245 N/A N/A a.62.1 Hepatitis B viral capsid (hbcag)
View Download 0.244 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.243 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.242 N/A N/A b.40.4 Nucleic acid-binding proteins
View Download 0.240 N/A N/A f.31.1 Photosystem I reaction center subunit XI, PsaL
View Download 0.238 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.235 N/A N/A f.21.1 Transmembrane di-heme cytochromes
View Download 0.233 N/A N/A c.23.5 Flavoproteins
View Download 0.232 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.232 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.229 N/A N/A a.24.4 Hemerythrin
View Download 0.227 N/A N/A a.48.2 Transferrin receptor ectodomain, C-terminal domain
View Download 0.227 N/A N/A a.63.1 Apolipophorin-III
View Download 0.226 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.226 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.219 N/A N/A a.25.1 Ferritin-like
View Download 0.219 N/A N/A a.90.1 Transcription factor STAT-4 N-domain
View Download 0.219 N/A N/A a.24.4 Hemerythrin
View Download 0.217 N/A N/A a.1.1 Globin-like
View Download 0.214 N/A N/A f.35.1 Multidrug efflux transporter AcrB transmembrane domain
View Download 0.213 N/A N/A a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.212 N/A N/A a.63.1 Apolipophorin-III
View Download 0.212 N/A N/A a.25.1 Ferritin-like
View Download 0.210 N/A N/A f.25.1 Cytochrome c oxidase subunit III-like
View Download 0.210 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.209 N/A N/A c.23.5 Flavoproteins
View Download 0.207 N/A N/A c.44.1 Phosphotyrosine protein phosphatases I
View Download 0.202 N/A N/A a.19.1 Fertilization protein
View Download 0.200 N/A N/A a.25.1 Ferritin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle