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View Structure Prediction Details

Protein: YPK9
Organism: Saccharomyces cerevisiae
Length: 1472 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPK9.

Description E-value Query
Range		 Subject
Range
YPK9_YEAST - Vacuolar cation-transporting ATPase YPK9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YPK9 - Vacuolar protein with a possible role in sequestering heavy metals; has similarity to the type V P-t...
 0.0 [1..1472] [1..1472]
AT1A1_SHEEP - Sodium/potassium-transporting ATPase subunit alpha-1 OS=Ovis aries GN=ATP1A1 PE=1 SV=1
 0.0 [410..1461] [4..1017]
AT1A1_HORSE - Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1
 0.0 [410..1461] [4..1017]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
 0.0 [410..1461] [4..1017]
gi|89248 - pir||B24862 Na+/K+-exchanging ATPase (EC 3.6.3.9) alpha chain - pig
AT1A1_PIG - Sodium/potassium-transporting ATPase subunit alpha-1 OS=Sus scrofa GN=ATP1A1 PE=1 SV=1
 0.0 [410..1461] [4..1017]
AT1A1_MOUSE - Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus GN=Atp1a1 PE=1 SV=1
 0.0 [392..1461] [6..1019]
AT1A1_RAT - Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus GN=Atp1a1 PE=1 SV=1
 0.0 [392..1461] [6..1019]
AT1A3_CHICK - Sodium/potassium-transporting ATPase subunit alpha-3 OS=Gallus gallus GN=ATP1A3 PE=2 SV=1
 0.0 [414..1461] [3..1006]
gi|168277394, gi... - gi|168277394|dbj|BAG10675.1| sodium/potassium-transporting ATPase subunit alpha-1 precursor [synthet...
ATP1A1 - ATPase, Na+/K+ transporting, alpha 1 polypeptide
 0.0 [392..1461] [6..1019]

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Predicted Domain #1
Region A:
Residues: [1-414] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIPSSNQIQ HGQRSERNRR MPRASFSSTA TTSTAATLTS AMVLDQNNSE PYAGATFEAV  60
   61 PSSIVSFHHP HSFQSSNLPS PHSSGNLEQR GRRLTESEPL VLSSAEQSRS SSRNPSHFRF 120
  121 FTQEQISNAE GASTLENTDY DMAWDATPAY EQDRIYGTGL SSRRSSIRSF SRASSLSNAK 180
  181 SYGSFSKRGR SGSRAPQRLG ENSDTGFVYH SATHSSSSLS RYTTRERIPI ELESQTDEIL 240
  241 EDESSTHSLE SSDSRRSASE NNRGSFSGHD DVHNQHSEYL KPDYHEKFYP QYAPNLHYQR 300
  301 FYIAEEDLVI GIAAYQTSKF WYIIYNLCCF LTFGLVYLLT RWLPHLKVKL YGVKVPLAKA 360
  361 EWVVIENEFG EFVIQPIDRQ WYNRPLSTVL PFENYPNPSY EPNDINLSHH HANE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [415-480] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INPNVPILIT FEYRYIKFIY SPLDDLFKTN NNWIDPDWVD LSTVSNGLTK GVQEDRELAF  60
   61 GKNQIN

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [552-683] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVRVLRDKFW TTISSSELVP GDIYEVSDPN ITILPCDSIL LSSDCIVNES MLTGESVPVS  60
   61 KFPATEETMY QLCDDFQSTQ ISSFVSKSFL YNGTNIIRAR IAPGQTAALA MVVRTGFSTT 120
  121 KGSLVRSMVF PK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1063.0103
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #3
Region A:
Residues: [481-541] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRMKTTSEIL FNEVLHPFYV FQVFSIILWG IDEYYYYAAC IFLISVLSIF DSLNEQKKVS  60
   61 R

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [684-748] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTGFKFYRDS FKYIGFMSLI AIFGFCVSCV QFIKLGLDKK TMILRALDII TIVVPPALPA  60
   61 TLTIG

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [1235-1472] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALVTSFACFQ YMSLYSAIQF ITITILYSRG SNLGDFQFLY IDLLLIVPIA ICMSWSKSYE  60
   61 KIDKKRPSAN LVSPKILVPL LISVFLVFLF QFIPWIIVQK MSWYIKPIVG GDDAVQSSDN 120
  121 TVLFFVSNFQ YILTAIVLSV GPPYREPMSK NFEFIVDITV SIGASLLLMT LDTESYLGKM 180
  181 LQLTPISNSF TMFIIVWVIL NYYAQLYIPP SIKGWLKKKK SSKKYKLLIQ EEMKLKEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1063.0103
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #4
Region A:
Residues: [542-551] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLAEMSHFHC

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [749-788] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNFALSRLKE KGIFCISPTR LNISGKIDVM CFDKTGTLTE

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [1031-1234] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKKETSETLK SLQDANIRTI MCTGDNILTA ISVGREAGLI QCSRVYVPSI NDTPLHGEPV  60
   61 IVWRDVNEPD KILDTKTLKP VKLGNNSVES LRECNYTLAV SGDVFRLLFR DENEIPEEYL 120
  121 NEILLNSSIY ARMSPDEKHE LMIQLQKLDY TVGFCGDGAN DCGALKAADV GISLSEAEAS 180
  181 VAAPFTSKIF NISCVLDVIR EGRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1063.0103
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #5
Region A:
Residues: [789-1030] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGLDVLGVQI SEPNGVRGQK FGELLSDIRQ VFPKFSLNDC SSPLDFKSRN FFMSLLTCHS  60
   61 LRSVDGNLLG DPLDFKMFQF TGWSFEEDFQ KRAFHSLYEG RHEDDVFPEN SEIIPAVVHP 120
  121 DSNNRENTFT DNDPHNFLGV VRSFEFLSEL RRMSVIVKTN NDDVYWSFTK GAPEVISEIC 180
  181 NKSTLPADFE EVLRCYTHNG YRVIACAGKT LPKRTWLYSQ KVSREEVESN LEFLGFIIFQ 240
  241 NK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1063.0103
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle