YRC Public Data Repository - Protein Structure Prediction

Protein:	YOR283W
Organism:	Saccharomyces cerevisiae
Length:	230 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR283W.

Description	E-value	Query Range	Subject Range
gi\|190407583 - gi\|190407583\|gb\|EDV10850.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YOR283W - Phosphatase with a broad substrate specificity and some similarity to GPM1/YKL152C, a phosphoglycera... gi\|207340943 - gi\|207340943\|gb\|EDZ69139.1\| YOR283Wp-like protein [Saccharomyces cerevisiae AWRI1631] YO283_YEAST - Broad-specificity phosphatase YOR283W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YO... gi\|151945365 - gi\|151945365\|gb\|EDN63608.1\| conserved protein [Saccharomyces cerevisiae YJM789]	2.0E-55	[1..230]	[1..230]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	1.0E-53	[18..227]	[5..243]
gi\|109090155, gi... - gi\|109149555\|ref\|XP_001082818.1\| PREDICTED: phosphoglycerate mutase 1 (brain) isoform 2 [Macaca mula... gi\|67970637 - gi\|67970637\|dbj\|BAE01661.1\| unnamed protein product [Macaca fascicularis] gi\|194041793 - gi\|194041793\|ref\|XP_001928786.1\| PREDICTED: similar to Phosphoglycerate mutase 1 (Phosphoglycerate m... gi\|114632193 - gi\|114632193\|ref\|XP_507959.2\| PREDICTED: phosphoglycerate mutase 1 (brain) isoform 3 [Pan troglodyte... PGAM1 - phosphoglycerate mutase 1 (brain) ENSCJAT00000032245 - null gi\|123992778, gi... - gi\|123999524\|gb\|ABM87317.1\| phosphoglycerate mutase 1 (brain) [synthetic construct], gi\|123992778\|gb...	1.0E-53	[18..227]	[5..243]
gi\|8248819 - gi\|8248819\|gb\|AAB19888.2\| phosphoglycerate mutase type B subunit [Rattus sp.]	2.0E-53	[18..227]	[5..243]
PGAM2_MOUSE - Phosphoglycerate mutase 2 OS=Mus musculus GN=Pgam2 PE=1 SV=3	7.0E-53	[15..227]	[2..243]
PGAM2_RAT - Phosphoglycerate mutase 2 OS=Rattus norvegicus GN=Pgam2 PE=1 SV=2	1.0E-52	[15..227]	[2..243]
gi\|220954974, gi... - gi\|220954974\|gb\|ACL90030.1\| Pglym78-PA [synthetic construct], gi\|220945158\|gb\|ACL85122.1\| Pglym78-PA... Pglym78-PA, Pgly... - The gene Phosphoglyceromutase is referred to in FlyBase by the symbol Dmel\Pglym78 (CG1721, FBgn0014... gi\|111145347 - gi\|111145347\|gb\|ABH06889.1\| phosphoglyceromutase [Drosophila simulans]	3.0E-51	[18..227]	[6..245]

Back

Predicted Domain #1

Region A:
Residues: [1-230]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEVPYYCD NDDNNIIRLF IIRHGQTEHN VKKILQGHKD TSINPTGEEQ ATKLGHYLRS  60
   61 RGIHFDKVVS SDLKRCRQTT ALVLKHSKQE NVPTSYTSGL RERYMGVIEG MQITEAEKYA 120
  121 DKHGEGSFRN FGEKSDDFVA RLTGCVEEEV AEASNEGVKN LALVSHGGAI RMILQWLKYE 180
  181 NHQAHKIIVF NTSVTIVDYV KDSKQFIVRR VGNTQHLGDG EFVVSDLRLR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	164.39794
Match:	1ljdA_
Description:	No description for 1ljdA_ was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits