| Protein: | GCD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 578 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [24..497] | [64..518] |
|
|
0.0 | [34..497] | [38..481] |
|
|
0.0 | [34..497] | [77..521] |
|
|
0.0 | [9..497] | [60..529] |
|
|
0.0 | [34..497] | [79..522] |
|
|
0.0 | [30..497] | [68..518] |
|
|
0.0 | [9..497] | [63..523] |
|
|
0.0 | [9..497] | [62..522] |
|
Region A: Residues: [1-345] |
1 11 21 31 41 51
| | | | | |
1 MSIQAFVFCG KGSNLAPFTQ PDFPFQTQNK DSTAATSGDK LNELVNSALD STVINEFMQH 60
61 STRLPKALLP IGNRPMIEYV LDWCDQADFK EISVVAPVDE IELIESGLTS FLSLRKQQFE 120
121 LIYKALSNSN HSHHLQDPKK INFIPSKANS TGESLQKELL PRINGDFVIL PCDFVTDIPP 180
181 QVLVDQFRNR DDNNLAMTIY YKNSLDSSID KKQQQKQKQQ QFFTVYSENE DSERQPILLD 240
241 VYSQRDVTKT KYLQIRSHLL WNYPNLTVST KLLNSFIYFC SFELCQLLKL GPQSMSRQAS 300
301 FKDPFTGNQQ QQNPPTTDDD EDRNHDDDDD YKPSATSIQP TYFKK
|
| Detection Method: |  |
| Confidence: | 84.154902 |
| Match: | 1hv9A_ |
| Description: | N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.88676710996045 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.86990263440735 | bayes_pls_golite062009 |
| transferase activity | 1.47184463413038 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.992215002450258 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 0.796949457473955 | bayes_pls_golite062009 |
| acyltransferase activity | 0.741838450922005 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.717805296858439 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 0.619458068514795 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 0.555398952276587 | bayes_pls_golite062009 |
| binding | 0.456682720062287 | bayes_pls_golite062009 |
| O-acyltransferase activity | 0.319932817519902 | bayes_pls_golite062009 |
|
Region A: Residues: [346-578] |
1 11 21 31 41 51
| | | | | |
1 KNDLILDPIN CNKSLSKVFR DLSRRSWQHS KPREPIGIFI LPNETLFIRA NNLNAYMDAN 60
61 RFVLKIKSQT MFTKNIQIQS AAIGADAIVD PKCQISAHSN VKMSVLGTQA NIGSRCRVAG 120
121 SLLFPGVHLG DEVILENCII GPMAKIGSKC KLSNCYIEGH YVVEPKNNFK GETLANVYLD 180
181 EDEEDELIYD DSVIAGESEI AEETDSDDRS DEDSDDSEYT DEYEYEDDGL FER
|
| Detection Method: | |
| Confidence: | 84.154902 |
| Match: | 1hv9A_ |
| Description: | N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
